Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   NCGM2_RS28630 Genome accession   NC_017549
Coordinates   6180618..6181025 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa NCGM2.S1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 6175618..6186025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCGM2_RS28610 (NCGM2_5786) pilK 6176550..6177425 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  NCGM2_RS28615 (NCGM2_5787) pilJ 6177486..6179534 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  NCGM2_RS28620 (NCGM2_5788) - 6179619..6180155 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  NCGM2_RS28625 (NCGM2_5789) pilH 6180206..6180571 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  NCGM2_RS28630 (NCGM2_5790) pilG 6180618..6181025 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  NCGM2_RS28635 (NCGM2_5791) gshB 6181280..6182233 (+) 954 WP_003100943.1 glutathione synthase -
  NCGM2_RS28640 (NCGM2_5792) - 6182380..6183273 (+) 894 WP_003084580.1 TonB family protein -
  NCGM2_RS28645 (NCGM2_5793) - 6183322..6183891 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  NCGM2_RS28650 (NCGM2_5794) ruvX 6183891..6184325 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  NCGM2_RS28655 (NCGM2_5795) pyrR 6184437..6184949 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NCGM2_RS28660 (NCGM2_5796) - 6184973..6185977 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=39329 NCGM2_RS28630 WP_003084583.1 6180618..6181025(-) (pilG) [Pseudomonas aeruginosa NCGM2.S1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=39329 NCGM2_RS28630 WP_003084583.1 6180618..6181025(-) (pilG) [Pseudomonas aeruginosa NCGM2.S1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment