Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | NCGM2_RS28625 | Genome accession | NC_017549 |
| Coordinates | 6180206..6180571 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa NCGM2.S1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 6175206..6185571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCGM2_RS28610 (NCGM2_5786) | pilK | 6176550..6177425 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| NCGM2_RS28615 (NCGM2_5787) | pilJ | 6177486..6179534 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| NCGM2_RS28620 (NCGM2_5788) | - | 6179619..6180155 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| NCGM2_RS28625 (NCGM2_5789) | pilH | 6180206..6180571 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| NCGM2_RS28630 (NCGM2_5790) | pilG | 6180618..6181025 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| NCGM2_RS28635 (NCGM2_5791) | gshB | 6181280..6182233 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| NCGM2_RS28640 (NCGM2_5792) | - | 6182380..6183273 (+) | 894 | WP_003084580.1 | TonB family protein | - |
| NCGM2_RS28645 (NCGM2_5793) | - | 6183322..6183891 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| NCGM2_RS28650 (NCGM2_5794) | ruvX | 6183891..6184325 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| NCGM2_RS28655 (NCGM2_5795) | pyrR | 6184437..6184949 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=39328 NCGM2_RS28625 WP_003084587.1 6180206..6180571(-) (pilH) [Pseudomonas aeruginosa NCGM2.S1]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=39328 NCGM2_RS28625 WP_003084587.1 6180206..6180571(-) (pilH) [Pseudomonas aeruginosa NCGM2.S1]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |