Detailed information NTG0393272

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GCU53_RS07700
• Genome accession: NZ_CP045302
• Coordinates: 1629636..1630976 (+)
• Length: 446 a.a.
• NCBI ID: WP_152387102.1
• Uniprot ID: -
• Organism: Azotobacter salinestris strain KACC 13899
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1624636..1635976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GCU53_RS07680	-	1624762..1625775 (+)	1014	WP_152387099.1	outer membrane protein assembly factor BamD	-
GCU53_RS07685	-	1625873..1627507 (-)	1635	WP_208845454.1	NAD+ synthase	-
GCU53_RS07690	-	1627735..1627977 (+)	243	WP_152387101.1	PP0621 family protein	-
GCU53_RS07695	pilS	1627982..1629574 (+)	1593	WP_152389817.1	ATP-binding protein	Regulator
GCU53_RS07700	pilR	1629636..1630976 (+)	1341	WP_152387102.1	sigma-54 dependent transcriptional regulator	Regulator
GCU53_RS07705	thiO	1631057..1632154 (-)	1098	WP_152387103.1	glycine oxidase ThiO	-
GCU53_RS07710	-	1632344..1632907 (+)	564	WP_152387104.1	GspH/FimT family pseudopilin	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49789.10 Da
• Isoelectric Point: 5.5802

>NTDB_id=393272 GCU53_RS07700 WP_152387102.1 1629636..1630976(+) (pilR) [Azotobacter salinestris strain KACC 13899]
MSVRQKALIVDDEPDIRELLEITLGRMKLDTRSARNLQEAREWLGRERFDLCLTDMRLPDGSGLELVQYIQQHHAQVPVA
MITAYGSLDTAVNALKAGAFDFLTKPVDLARLRELVATALRLHAPVGEEAPVDNRLIGDSPPMRTLRKQIARLARSQAPV
YVSGESGSGKEVVARLIHEQGPRAERPFVPVNCGAIPSELMESEFFGHRKGSFTGAIEDKQGLFQVASGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLYYRLNVIELHVPPLRERREDIPALAAI
MLARLAEDAGLPAARLSEEALEKLQSYRFPGNVRELENMLERAHTLCEDDLIQARDLRLCDTPSPGESGETSLAGIDNLE
DYLEELERRLIMQALEEARWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1341 bp

>NTDB_id=393272 GCU53_RS07700 WP_152387102.1 1629636..1630976(+) (pilR) [Azotobacter salinestris strain KACC 13899]
ATGAGTGTCCGCCAGAAAGCCCTGATCGTCGACGACGAGCCCGACATCCGCGAACTGCTGGAAATCACCTTGGGCCGGAT
GAAGCTCGACACCCGCAGCGCACGCAACCTCCAGGAGGCGCGCGAATGGCTGGGCCGCGAGCGCTTCGATCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGTAGCGGCCTCGAGCTGGTGCAGTACATTCAGCAGCATCACGCCCAGGTCCCGGTCGCC
ATGATCACTGCCTACGGCAGTCTGGATACCGCGGTCAACGCGCTCAAGGCCGGCGCCTTCGACTTCCTGACCAAGCCGGT
CGACTTGGCCCGCCTGCGCGAACTGGTGGCCACCGCCCTGCGCCTGCATGCGCCGGTTGGCGAGGAGGCGCCGGTGGACA
ACCGGCTGATCGGCGACTCGCCGCCGATGCGCACCCTACGCAAGCAGATCGCCAGGCTGGCGCGCAGCCAGGCGCCGGTC
TACGTCAGTGGCGAGTCCGGTAGCGGCAAGGAAGTGGTGGCCCGCCTGATCCACGAGCAAGGCCCGCGCGCCGAGCGCCC
CTTCGTCCCGGTGAATTGTGGTGCCATTCCCTCGGAGCTGATGGAGAGCGAGTTCTTCGGCCATCGCAAGGGAAGCTTCA
CCGGCGCCATCGAGGACAAGCAGGGCCTGTTCCAGGTCGCCAGCGGCGGCACCCTGTTCCTCGACGAGGTAGCCGACCTG
CCGCTGCCGATGCAGGTCAAACTGCTGCGCGCCATTCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTGGT
GGTGGACGTGCGTATCCTCAGCGCGACCCACAAGGATCTGGCCGCCGAGGTCGCTGCCGGCCGTTTCCGCCAGGATCTCT
ATTACCGCCTGAACGTCATCGAGCTGCACGTTCCGCCGCTGCGCGAGCGGCGCGAGGACATTCCGGCGCTGGCGGCGATC
ATGCTGGCGCGCCTGGCGGAAGACGCCGGCCTGCCTGCTGCCCGGCTCAGCGAGGAAGCCCTGGAAAAGCTCCAGAGCTA
CCGCTTCCCGGGCAACGTGCGCGAACTGGAGAACATGCTGGAGCGGGCCCATACCCTCTGCGAGGACGACCTGATCCAGG
CCCGCGACCTGCGCCTCTGCGACACCCCGAGCCCGGGCGAGAGCGGCGAAACCTCGCTGGCCGGCATCGACAACCTCGAG
GACTACCTGGAGGAACTCGAGCGCCGGCTGATCATGCAGGCCCTCGAGGAAGCGCGCTGGAATCGTACCGCCGCCGCGCA
GCGCCTGGGCCTGACCTTCCGCTCCATGCGCTACCGCCTGAAGAAACTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (136-302)

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.327	99.327	0.848
pilR	Acinetobacter baumannii strain A118	49.134	100	0.509