Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | NCGM2_RS02335 | Genome accession | NC_017549 |
| Coordinates | 517122..517745 (+) | Length | 207 a.a. |
| NCBI ID | WP_003095838.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa NCGM2.S1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 512122..522745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCGM2_RS02320 (NCGM2_0467) | - | 512809..515280 (-) | 2472 | WP_003095841.1 | penicillin-binding protein 1A | - |
| NCGM2_RS02325 (NCGM2_0468) | pilM | 515465..516529 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| NCGM2_RS02330 (NCGM2_0469) | pilN | 516529..517125 (+) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| NCGM2_RS02335 (NCGM2_0470) | pilO | 517122..517745 (+) | 624 | WP_003095838.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| NCGM2_RS02340 (NCGM2_0471) | comL/pilP | 517742..518266 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| NCGM2_RS02345 (NCGM2_0472) | pilQ | 518320..520464 (+) | 2145 | WP_003095835.1 | type 4a pilus secretin PilQ | Machinery gene |
| NCGM2_RS02350 (NCGM2_0473) | aroK | 520476..520994 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| NCGM2_RS02355 (NCGM2_0474) | aroB | 521044..522150 (+) | 1107 | WP_003095831.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22805.23 Da Isoelectric Point: 4.7787
>NTDB_id=39258 NCGM2_RS02335 WP_003095838.1 517122..517745(+) (pilO) [Pseudomonas aeruginosa NCGM2.S1]
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=39258 NCGM2_RS02335 WP_003095838.1 517122..517745(+) (pilO) [Pseudomonas aeruginosa NCGM2.S1]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGGTACAACTTCCATCTGAGCGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTTGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGGTACAACTTCCATCTGAGCGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTTGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
44.211 |
91.787 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.684 |
91.787 |
0.401 |