Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GA597_RS02115 Genome accession   NZ_CP045137
Coordinates   423769..424437 (+) Length   222 a.a.
NCBI ID   WP_053026266.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain VB5326     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 418769..429437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA597_RS02085 (GA597_01190) - 419295..419939 (+) 645 WP_152234986.1 hypothetical protein -
  GA597_RS02090 (GA597_01185) - 419927..420346 (+) 420 WP_152234984.1 hypothetical protein -
  GA597_RS02095 (GA597_01180) - 420494..421255 (+) 762 WP_338014392.1 LCP family protein -
  GA597_RS02100 (GA597_01175) - 421345..422820 (-) 1476 WP_016930640.1 alkaline phosphatase -
  GA597_RS02105 - 423219..423389 (+) 171 WP_011274728.1 hypothetical protein -
  GA597_RS02110 (GA597_01170) - 423575..423739 (+) 165 WP_016930641.1 hypothetical protein -
  GA597_RS02115 (GA597_01165) braR 423769..424437 (+) 669 WP_053026266.1 response regulator transcription factor Regulator
  GA597_RS02120 (GA597_01160) braS 424440..425336 (+) 897 WP_119890352.1 sensor histidine kinase Regulator
  GA597_RS02125 (GA597_01155) - 425518..426267 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  GA597_RS02130 (GA597_01150) - 426269..428260 (+) 1992 WP_119890353.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25707.56 Da        Isoelectric Point: 4.6536

>NTDB_id=392239 GA597_RS02115 WP_053026266.1 423769..424437(+) (braR) [Staphylococcus haemolyticus strain VB5326]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVIVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=392239 GA597_RS02115 WP_053026266.1 423769..424437(+) (braR) [Staphylococcus haemolyticus strain VB5326]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTATTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

99.55

0.766

Multiple sequence alignment