Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   GA597_RS02120 Genome accession   NZ_CP045137
Coordinates   424440..425336 (+) Length   298 a.a.
NCBI ID   WP_119890352.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain VB5326     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 419440..430336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA597_RS02090 (GA597_01185) - 419927..420346 (+) 420 WP_152234984.1 hypothetical protein -
  GA597_RS02095 (GA597_01180) - 420494..421255 (+) 762 WP_338014392.1 LCP family protein -
  GA597_RS02100 (GA597_01175) - 421345..422820 (-) 1476 WP_016930640.1 alkaline phosphatase -
  GA597_RS02105 - 423219..423389 (+) 171 WP_011274728.1 hypothetical protein -
  GA597_RS02110 (GA597_01170) - 423575..423739 (+) 165 WP_016930641.1 hypothetical protein -
  GA597_RS02115 (GA597_01165) braR 423769..424437 (+) 669 WP_053026266.1 response regulator transcription factor Regulator
  GA597_RS02120 (GA597_01160) braS 424440..425336 (+) 897 WP_119890352.1 sensor histidine kinase Regulator
  GA597_RS02125 (GA597_01155) - 425518..426267 (+) 750 WP_011274732.1 ABC transporter ATP-binding protein -
  GA597_RS02130 (GA597_01150) - 426269..428260 (+) 1992 WP_119890353.1 ABC transporter permease -
  GA597_RS02135 (GA597_01145) - 428349..429539 (+) 1191 WP_152234982.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34607.24 Da        Isoelectric Point: 6.6935

>NTDB_id=392240 GA597_RS02120 WP_119890352.1 424440..425336(+) (braS) [Staphylococcus haemolyticus strain VB5326]
MLKAFIKSILNEIIIVITCILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCENEILTDAQWCSIMIEQILNNALKYARGKDIWIVFDQQQQVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHYVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=392240 GA597_RS02120 WP_119890352.1 424440..425336(+) (braS) [Staphylococcus haemolyticus strain VB5326]
ATGCTGAAAGCTTTTATTAAATCGATATTAAATGAAATCATTATAGTTATTACATGTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACGAAAATCCATTATGAACGTTGTGAAAATGA
GATTCTGACGGATGCACAATGGTGTTCAATAATGATTGAACAAATTCTTAATAATGCATTGAAGTATGCACGGGGCAAAG
ATATTTGGATTGTGTTTGACCAACAACAGCAAGTATTGACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATTATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614

Multiple sequence alignment