Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GA721_RS03655 Genome accession   NZ_CP045131
Coordinates   776856..777239 (+) Length   127 a.a.
NCBI ID   WP_005179541.1    Uniprot ID   A0A6C0Y077
Organism   Acinetobacter indicus strain TQ18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 768434..778164 776856..777239 within 0


Gene organization within MGE regions


Location: 768434..778164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA721_RS03630 - 768434..769753 (+) 1320 WP_127801596.1 hypothetical protein -
  GA721_RS03635 - 769809..771524 (-) 1716 WP_127801595.1 proline--tRNA ligase -
  GA721_RS03640 - 771622..774726 (-) 3105 WP_160242916.1 efflux RND transporter permease subunit -
  GA721_RS03645 - 774733..775878 (-) 1146 WP_160242917.1 efflux RND transporter periplasmic adaptor subunit -
  GA721_RS03650 - 775933..776526 (-) 594 WP_171525083.1 hypothetical protein -
  GA721_RS03655 pilG 776856..777239 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  GA721_RS03660 - 777256..777624 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  GA721_RS03665 - 777628..778164 (+) 537 WP_005179538.1 chemotaxis protein CheW -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14225.27 Da        Isoelectric Point: 4.7066

>NTDB_id=392169 GA721_RS03655 WP_005179541.1 776856..777239(+) (pilG) [Acinetobacter indicus strain TQ18]
MDDKLQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=392169 GA721_RS03655 WP_005179541.1 776856..777239(+) (pilG) [Acinetobacter indicus strain TQ18]
ATGGACGATAAACTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACTTTATT
ACAGCGTGAAGGCTATGAAGTGGTCACTGCCGTCGACGGTTTTGAAGCATTGTCTAAAATTGCCGATGCAAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCACGTCTAGATGGCTATCAAACCTGCGCATTAATTAAAAACTCGCAAAACTACCAG
AATATTCCAGTCATCATGCTGTCCAGTAAAGATGGTCTGTTCGATCAGGCCAAAGGCCGTGTGGTGGGTTCAGATGAATA
TTTAACCAAACCTTTTAGTAAAGATGAGCTTTTAAACGCGATTCGTAATCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0Y077

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment