Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   FQU82_RS03315 Genome accession   NZ_CP045110
Coordinates   667768..668178 (+) Length   136 a.a.
NCBI ID   WP_001200144.1    Uniprot ID   A0A6F8TJU0
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 662768..673178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQU82_RS03300 (FQU82_00633) - 663757..666063 (+) 2307 WP_000259109.1 RelA/SpoT family protein -
  FQU82_RS03305 (FQU82_00634) - 666108..666881 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  FQU82_RS03310 (FQU82_00635) mazG 666993..667799 (+) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  FQU82_RS03315 (FQU82_00636) comEA 667768..668178 (+) 411 WP_001200144.1 ComEA family DNA-binding protein Machinery gene
  FQU82_RS03320 (FQU82_00637) pcnB 668303..669766 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  FQU82_RS03325 (FQU82_00638) folK 669763..670245 (+) 483 WP_000219224.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  FQU82_RS03330 (FQU82_00639) panB 670291..671100 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  FQU82_RS03335 (FQU82_00640) panC 671104..671952 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  FQU82_RS03340 (FQU82_00641) rapZ 671975..672826 (+) 852 WP_000821671.1 RNase adapter RapZ -
  FQU82_RS03345 (FQU82_00642) - 672823..673092 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15747.09 Da        Isoelectric Point: 10.4475

>NTDB_id=391988 FQU82_RS03315 WP_001200144.1 667768..668178(+) (comEA) [Acinetobacter baumannii strain ATCC 19606]
MQYSMRFWKNKYFILIMLCLGVVSPSVYAQSFDQNFQEWKAKQQMYDQKLKITKSSHSNGSKISQTKNFNDFTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=391988 FQU82_RS03315 WP_001200144.1 667768..668178(+) (comEA) [Acinetobacter baumannii strain ATCC 19606]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTATTTTAATAATGTTGTGCTTGGGAGTAGTTTCACCTTCAGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAAGATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTTTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6F8TJU0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963

  comEA Acinetobacter baumannii D1279779

93.382

100

0.934

  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404


Multiple sequence alignment