Detailed information NTG0391936

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GBN93_RS01105
• Genome accession: NZ_CP045103
• Coordinates: 235868..237232 (-)
• Length: 454 a.a.
• NCBI ID: WP_412674384.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain AJ413
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 230868..242232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GBN93_RS01090 (GBN93_01105)	lptG	231928..232998 (+)	1071	WP_004692843.1	LPS export ABC transporter permease LptG	-
GBN93_RS01095 (GBN93_01110)	gpmI	233122..234669 (+)	1548	WP_087014488.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GBN93_RS01100 (GBN93_01115)	-	234688..235863 (+)	1176	WP_004692840.1	S41 family peptidase	-
GBN93_RS01105 (GBN93_01120)	pilR	235868..237232 (-)	1365	WP_412674384.1	sigma-54-dependent transcriptional regulator	Regulator
GBN93_RS01110 (GBN93_01125)	pilS	237305..238873 (-)	1569	WP_234965156.1	sensor histidine kinase	Regulator
GBN93_RS01115 (GBN93_01130)	-	238895..239530 (-)	636	WP_010325697.1	response regulator	-
GBN93_RS01120 (GBN93_01135)	-	239746..240801 (+)	1056	WP_159153606.1	serine hydrolase	-
GBN93_RS01125 (GBN93_01140)	thrC	240888..242027 (-)	1140	WP_125273422.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51058.81 Da
• Isoelectric Point: 7.0453

>NTDB_id=391936 GBN93_RS01105 WP_412674384.1 235868..237232(-) (pilR) [Acinetobacter johnsonii strain AJ413]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIHQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNAGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANTMQQGTVGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=391936 GBN93_RS01105 WP_412674384.1 235868..237232(-) (pilR) [Acinetobacter johnsonii strain AJ413]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTGAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ACTATCCTAATTTACCCGTTGCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCAATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCATCAGCTACGCATCACCT
TAAAAAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACAGGTGAGTCAGGCACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGCAATCGTAATGCAGGGCCATTTATTGCCATTAACTGCGGTGCCATTCCGACTGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAGGGTAGCTTTACAGGGGCGACTCAAGACAAACAAGGATTGATTCTGTCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTGCCGCTCACTATGCAGGTGAAACTGCTGCGTGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTACTGCCTGCTCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGTCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAATTACGCAATATGATGGAACGTGC
CATCACTTTAAGCGATGAAAGCAGTATCGACTTACCGCACTTGCAAACAGCCCCACTGCGACCCATTGCTCAGACCAACT
ATGCCAATACCATGCAACAAGGTACTGTTGGCAATGATCAACTCAGTCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCATTGGAACCGAACACTGGC
GGCTAAAAAGCTCGGTATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.229	100	0.742
pilR	Pseudomonas aeruginosa PAK	48.78	99.339	0.485