Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   GBN68_RS05060 Genome accession   NZ_CP045101
Coordinates   1068641..1069348 (-) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain AJ210     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063641..1074348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBN68_RS05040 (GBN68_05070) - 1064494..1065813 (+) 1320 WP_004696178.1 adenylosuccinate synthase -
  GBN68_RS05045 (GBN68_05075) - 1066015..1066320 (+) 306 WP_178927675.1 hypothetical protein -
  GBN68_RS05050 (GBN68_05080) - 1066507..1067280 (+) 774 WP_004982314.1 M48 family metallopeptidase -
  GBN68_RS05055 (GBN68_05085) - 1067406..1068455 (-) 1050 WP_234955716.1 NADP(H)-dependent aldo-keto reductase -
  GBN68_RS05060 (GBN68_05090) crp 1068641..1069348 (-) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  GBN68_RS05065 (GBN68_05095) - 1069496..1069918 (+) 423 WP_224468737.1 OsmC family protein -
  GBN68_RS05070 (GBN68_05100) clpB 1070309..1072888 (+) 2580 WP_234955718.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=391906 GBN68_RS05060 WP_004696183.1 1068641..1069348(-) (crp) [Acinetobacter johnsonii strain AJ210]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=391906 GBN68_RS05060 WP_004696183.1 1068641..1069348(-) (crp) [Acinetobacter johnsonii strain AJ210]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCGAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGTCTATTCGAAGCAAACTCACAACGTACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAACTCAGCAAACAATACCCTGACCTGAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACTCGTAAAGTGACTGACCTTGCATTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
CTATCTTCGCAGCCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGCATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment