Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GBN68_RS02515 | Genome accession | NZ_CP045101 |
| Coordinates | 543168..543566 (+) | Length | 132 a.a. |
| NCBI ID | WP_159153639.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ210 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 538168..548566
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN68_RS02500 (GBN68_02520) | - | 539155..541461 (+) | 2307 | WP_004979149.1 | RelA/SpoT family protein | - |
| GBN68_RS02505 (GBN68_02525) | - | 541502..542269 (-) | 768 | WP_234955354.1 | SDR family oxidoreductase | - |
| GBN68_RS02510 (GBN68_02530) | mazG | 542388..543149 (+) | 762 | WP_234955356.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| GBN68_RS02515 (GBN68_02535) | comEA | 543168..543566 (+) | 399 | WP_159153639.1 | ComEA family DNA-binding protein | Machinery gene |
| GBN68_RS02520 (GBN68_02540) | pcnB | 543704..545173 (+) | 1470 | WP_159153640.1 | polynucleotide adenylyltransferase PcnB | - |
| GBN68_RS02525 (GBN68_02545) | folK | 545170..545658 (+) | 489 | WP_159153641.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| GBN68_RS02530 (GBN68_02550) | panB | 545695..546504 (+) | 810 | WP_004692301.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| GBN68_RS02535 (GBN68_02555) | panC | 546508..547350 (+) | 843 | WP_234955358.1 | pantoate--beta-alanine ligase | - |
| GBN68_RS02540 (GBN68_02560) | rapZ | 547377..548228 (+) | 852 | WP_004692298.1 | RNase adapter RapZ | - |
| GBN68_RS02545 (GBN68_02565) | - | 548225..548494 (+) | 270 | WP_010325935.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14669.13 Da Isoelectric Point: 10.8498
>NTDB_id=391904 GBN68_RS02515 WP_159153639.1 543168..543566(+) (comEA) [Acinetobacter johnsonii strain AJ210]
MIKIKVSLLIIALLLLSLLAWIPSSYAQSFDQNYLNWKAEQQAWDDRIQAPKSVKRAVSPVQAQPVSSTNKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL
MIKIKVSLLIIALLLLSLLAWIPSSYAQSFDQNYLNWKAEQQAWDDRIQAPKSVKRAVSPVQAQPVSSTNKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL
Nucleotide
Download Length: 399 bp
>NTDB_id=391904 GBN68_RS02515 WP_159153639.1 543168..543566(+) (comEA) [Acinetobacter johnsonii strain AJ210]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTTTACTGGCGTGGATACCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTATCTGAACTGGAAAGCAGAGCAGCAGGCGTGGGATGATCGTATTCAAGCTCCTAAAAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCTCAACCTGTGTCGAGCACAAATAAAATTAGTTTAAATCAAGCCAGTGTTGAT
CAATTACAGCAACTTCAGGGTGTGGGTCTAAAAAAGGCACAGGCAATTGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAGTTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACCCGTTTAGGCTTGTGA
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTTTACTGGCGTGGATACCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTATCTGAACTGGAAAGCAGAGCAGCAGGCGTGGGATGATCGTATTCAAGCTCCTAAAAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCTCAACCTGTGTCGAGCACAAATAAAATTAGTTTAAATCAAGCCAGTGTTGAT
CAATTACAGCAACTTCAGGGTGTGGGTCTAAAAAAGGCACAGGCAATTGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAGTTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACCCGTTTAGGCTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
54.918 |
92.424 |
0.508 |
| comEA | Acinetobacter baumannii D1279779 |
52.419 |
93.939 |
0.492 |
| comEA | Acinetobacter baylyi ADP1 |
44.86 |
81.061 |
0.364 |