Detailed information NTG0391894

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GBN68_RS00960
• Genome accession: NZ_CP045101
• Coordinates: 208130..209494 (-)
• Length: 454 a.a.
• NCBI ID: WP_410487276.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain AJ210
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 203130..214494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GBN68_RS00945 (GBN68_00950)	lptG	204190..205260 (+)	1071	WP_004692843.1	LPS export ABC transporter permease LptG	-
GBN68_RS00950 (GBN68_00955)	gpmI	205384..206931 (+)	1548	WP_087014488.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GBN68_RS00955 (GBN68_00960)	-	207016..208125 (+)	1110	WP_410487277.1	S41 family peptidase	-
GBN68_RS00960 (GBN68_00965)	pilR	208130..209494 (-)	1365	WP_410487276.1	sigma-54-dependent transcriptional regulator	Regulator
GBN68_RS00965 (GBN68_00970)	pilS	209567..211135 (-)	1569	WP_148826905.1	sensor histidine kinase	Regulator
GBN68_RS00970 (GBN68_00975)	-	211157..211792 (-)	636	WP_010325697.1	response regulator	-
GBN68_RS00975 (GBN68_00980)	-	212008..213063 (+)	1056	WP_005400997.1	serine hydrolase	-
GBN68_RS00980 (GBN68_00985)	thrC	213149..214288 (-)	1140	WP_004692833.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51082.81 Da
• Isoelectric Point: 6.8692

>NTDB_id=391894 GBN68_RS00960 WP_410487276.1 208130..209494(-) (pilR) [Acinetobacter johnsonii strain AJ210]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPINQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQVPVGNDQLGHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=391894 GBN68_RS00960 WP_410487276.1 208130..209494(-) (pilR) [Acinetobacter johnsonii strain AJ210]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTGCCCGTTGCAGTGCTGACTGCTTACGGCAACATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGCAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAACCCATCAATCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGCATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGTACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGTAATCGTAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCGATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGGCACCGTAAGGGTAGCTTTACAGGAGCGACTCAAGACAAACAAGGATTGATTCTGTCTGCGCATGGCG
GTAGTTTATTTTTAGATGAAATTGCTGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTACTGCCTGCTCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGTCAAGAATGGGACATCCCAGTCAAACCATTG
AGTGAACGTGCACGTGAATTTTTATTGGCTCAATATTATCCAGGCAATGTACGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCCCACTTACAAACAGCCCCATTGCGACCCATTGCTCAGACTAACT
ATGCCAATGCCACCCAACAAGTTCCTGTTGGCAATGATCAACTCGGTCATGTGCCTTCACGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAACCTCACCCACTGGAACCGCACTCTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAAAAATTTGGGTTAGATGGCGAAGACGATTCCG
TTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.67	100	0.747
pilR	Pseudomonas aeruginosa PAK	49.002	99.339	0.487