Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   F9230_RS11860 Genome accession   NZ_CP045099
Coordinates   2463872..2464579 (+) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain AJ14     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2458872..2469579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F9230_RS11850 (F9230_11850) clpB 2460332..2462911 (-) 2580 WP_234950448.1 ATP-dependent chaperone ClpB -
  F9230_RS11855 (F9230_11855) - 2463302..2463724 (-) 423 WP_004982311.1 OsmC family protein -
  F9230_RS11860 (F9230_11860) crp 2463872..2464579 (+) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  F9230_RS11865 (F9230_11865) - 2464766..2465815 (+) 1050 WP_234950449.1 NADP(H)-dependent aldo-keto reductase -
  F9230_RS11870 (F9230_11870) - 2465942..2466715 (-) 774 WP_004982314.1 M48 family metallopeptidase -
  F9230_RS11875 (F9230_11875) - 2466902..2467207 (-) 306 WP_004696180.1 hypothetical protein -
  F9230_RS11880 (F9230_11880) - 2467409..2468728 (-) 1320 WP_004696178.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=391871 F9230_RS11860 WP_004696183.1 2463872..2464579(+) (crp) [Acinetobacter johnsonii strain AJ14]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=391871 F9230_RS11860 WP_004696183.1 2463872..2464579(+) (crp) [Acinetobacter johnsonii strain AJ14]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGGCTATTCGAAGCAAACTCACAACGTACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTAACTTATGAAAACTTCCATGAACTCAGCAAGCAATACCCTGACCTAAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACACGTAAAGTGACTGACCTTGCATTTATCGACGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
TTATCGTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment