Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | F9230_RS01290 | Genome accession | NZ_CP045099 |
| Coordinates | 291343..291999 (+) | Length | 218 a.a. |
| NCBI ID | WP_234951048.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 286343..296999
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9230_RS01275 (F9230_01280) | - | 286753..287559 (+) | 807 | WP_234951046.1 | putative RNA methyltransferase | - |
| F9230_RS01280 (F9230_01285) | ponA | 287591..290119 (-) | 2529 | WP_234951047.1 | penicillin-binding protein PBP1a | - |
| F9230_RS01285 (F9230_01290) | pilM | 290285..291343 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| F9230_RS01290 (F9230_01295) | pilN | 291343..291999 (+) | 657 | WP_234951048.1 | PilN domain-containing protein | Machinery gene |
| F9230_RS01295 (F9230_01300) | pilO | 291996..292733 (+) | 738 | WP_234951049.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| F9230_RS01300 (F9230_01305) | pilP | 292733..293260 (+) | 528 | WP_094148569.1 | pilus assembly protein PilP | Machinery gene |
| F9230_RS01305 (F9230_01310) | pilQ | 293280..295358 (+) | 2079 | WP_184117977.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| F9230_RS01310 (F9230_01315) | aroK | 295396..295929 (+) | 534 | WP_062032260.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24210.65 Da Isoelectric Point: 5.1439
>NTDB_id=391848 F9230_RS01290 WP_234951048.1 291343..291999(+) (pilN) [Acinetobacter johnsonii strain AJ14]
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRIEETYGTFVVTADLDEIAQPVAPDATTPEAASAVNNSTAGAAQ
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRIEETYGTFVVTADLDEIAQPVAPDATTPEAASAVNNSTAGAAQ
Nucleotide
Download Length: 657 bp
>NTDB_id=391848 F9230_RS01290 WP_234951048.1 291343..291999(+) (pilN) [Acinetobacter johnsonii strain AJ14]
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTAGCTTGGTTCTTTTACAGCCAAAAACTGGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTGCAAGAGCAGCGCAATGCG
ATTGTAGAACGGATGAAATTGATCCAAGGTTTGCAAGGTCAACGCCCTGTAGCTGTGCGTTTAGTGGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGCAACCTAGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTTTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTATTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACGACACCTGAAGCCGCAAGTGCAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTAGCTTGGTTCTTTTACAGCCAAAAACTGGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTGCAAGAGCAGCGCAATGCG
ATTGTAGAACGGATGAAATTGATCCAAGGTTTGCAAGGTCAACGCCCTGTAGCTGTGCGTTTAGTGGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGCAACCTAGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTTTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTATTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACGACACCTGAAGCCGCAAGTGCAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
69.378 |
95.872 |
0.665 |
| comN | Acinetobacter baylyi ADP1 |
73.096 |
90.367 |
0.661 |