Detailed information    

insolico Bioinformatically predicted

Overview


Name   crp   Type   Regulator
Locus tag   GBN67_RS04515 Genome accession   NZ_CP045051
Coordinates   912155..912862 (-) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain AJ312     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 907155..917862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBN67_RS04495 (GBN67_04480) - 908008..909327 (+) 1320 WP_004696178.1 adenylosuccinate synthase -
  GBN67_RS04500 (GBN67_04485) - 909528..909833 (+) 306 WP_004696180.1 hypothetical protein -
  GBN67_RS04505 (GBN67_04490) - 910020..910793 (+) 774 WP_004982314.1 M48 family metallopeptidase -
  GBN67_RS04510 (GBN67_04495) - 910919..911968 (-) 1050 WP_234963660.1 NADP(H)-dependent aldo-keto reductase -
  GBN67_RS04515 (GBN67_04500) crp 912155..912862 (-) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  GBN67_RS04520 (GBN67_04505) - 913010..913432 (+) 423 WP_004982311.1 OsmC family protein -
  GBN67_RS04525 (GBN67_04510) clpB 913823..916402 (+) 2580 WP_218288248.1 ATP-dependent chaperone ClpB -

Sequence


Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=391525 GBN67_RS04515 WP_004696183.1 912155..912862(-) (crp) [Acinetobacter johnsonii strain AJ312]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=391525 GBN67_RS04515 WP_004696183.1 912155..912862(-) (crp) [Acinetobacter johnsonii strain AJ312]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGGCTATTCGAAGCAAACTCACAACGTACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTAACTTATGAAAACTTCCATGAACTCAGCAAGCAATACCCTGACCTAAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACACGTAAAGTGACTGACCTTGCATTTATCGACGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
TTATCGTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911

  crp Vibrio cholerae strain A1552

46.602

87.66

0.409

  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4


Multiple sequence alignment