Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GBN67_RS00595 | Genome accession | NZ_CP045051 |
| Coordinates | 125969..126625 (+) | Length | 218 a.a. |
| NCBI ID | WP_234963356.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ312 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 120969..131625
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN67_RS00580 (GBN67_00580) | - | 121378..122184 (+) | 807 | WP_234963354.1 | putative RNA methyltransferase | - |
| GBN67_RS00585 (GBN67_00585) | ponA | 122216..124744 (-) | 2529 | WP_234963355.1 | penicillin-binding protein PBP1a | - |
| GBN67_RS00590 (GBN67_00590) | pilM | 124911..125969 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| GBN67_RS00595 (GBN67_00595) | pilN | 125969..126625 (+) | 657 | WP_234963356.1 | PilN domain-containing protein | Machinery gene |
| GBN67_RS00600 (GBN67_00600) | pilO | 126622..127344 (+) | 723 | WP_004691497.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GBN67_RS00605 (GBN67_00605) | pilP | 127344..127871 (+) | 528 | WP_004691496.1 | pilus assembly protein PilP | Machinery gene |
| GBN67_RS00610 (GBN67_00610) | pilQ | 127891..129975 (+) | 2085 | WP_234963357.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| GBN67_RS00615 (GBN67_00615) | - | 130064..130546 (+) | 483 | WP_207778853.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24271.69 Da Isoelectric Point: 5.1439
>NTDB_id=391516 GBN67_RS00595 WP_234963356.1 125969..126625(+) (pilN) [Acinetobacter johnsonii strain AJ312]
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVVSDATTPEAANTVNNSTAGAAQ
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVVSDATTPEAANTVNNSTAGAAQ
Nucleotide
Download Length: 657 bp
>NTDB_id=391516 GBN67_RS00595 WP_234963356.1 125969..126625(+) (pilN) [Acinetobacter johnsonii strain AJ312]
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTTGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTACAAGAACAGCGCAATGCA
ATTGTAGAACGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGCCCTGTAGCTGTGCGTTTAGTGGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGCAACCTAGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTTACCGC
GGATTTAGATGAGATTGCTCAGCCAGTAGTGTCTGATGCGACTACACCTGAAGCAGCAAATACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTTGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTACAAGAACAGCGCAATGCA
ATTGTAGAACGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGCCCTGTAGCTGTGCGTTTAGTGGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGCAACCTAGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTTACCGC
GGATTTAGATGAGATTGCTCAGCCAGTAGTGTCTGATGCGACTACACCTGAAGCAGCAAATACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
69.856 |
95.872 |
0.67 |
| comN | Acinetobacter baylyi ADP1 |
74.611 |
88.532 |
0.661 |