Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LG542_RS03610 Genome accession   NZ_CP045007
Coordinates   719752..721023 (+) Length   423 a.a.
NCBI ID   WP_057908442.1    Uniprot ID   A0AA89I113
Organism   Latilactobacillus graminis strain LG542     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 714752..726023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG542_RS03595 (LG542_03600) - 715044..717791 (-) 2748 WP_057908445.1 YhgE/Pip domain-containing protein -
  LG542_RS03600 (LG542_03605) - 718021..718773 (+) 753 WP_057908444.1 isoprenyl transferase -
  LG542_RS03605 (LG542_03610) - 718788..719576 (+) 789 WP_057908443.1 phosphatidate cytidylyltransferase -
  LG542_RS03610 (LG542_03615) eeP 719752..721023 (+) 1272 WP_057908442.1 RIP metalloprotease RseP Regulator
  LG542_RS03615 (LG542_03620) - 721049..722770 (+) 1722 WP_057908441.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45975.71 Da        Isoelectric Point: 9.8618

>NTDB_id=391197 LG542_RS03610 WP_057908442.1 719752..721023(+) (eeP) [Latilactobacillus graminis strain LG542]
MAAIIAFIIIFGILVVVHEFGHFYMAKRAGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEPG
TQATLLLDEQGIVQKINTSSKVTTLNGVPFQIAKTDLQKALWLEGYESGDESELKRYSVDHDATIIEADGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIIGTVMPNSAAQKAGLKPNDHIVKVAGQKVTTFTDF
SQIITKYPNHAVSLQISRATKMKTLQVTPKAVKTDGQKQKVGQLGVTAALNQHVGAKLQYGFTQAWTNASQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSINLGIMNLIPIPALDGGKLVINVIEALRGKPISPEKEGIVTL
VGVGIMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=391197 LG542_RS03610 WP_057908442.1 719752..721023(+) (eeP) [Latilactobacillus graminis strain LG542]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGTATTTTAGTAGTGGTGCATGAATTCGGACATTTTTATATGGCCAA
ACGCGCGGGCATTTTGGTACGCGAATTTTCAATTGGCATGGGTCCGAAATTGTTTGCAACCCGTAAAAACGGAACAACTT
ATACCATTCGTTGGTTACCACTTGGCGGTTACGTGCGCATGGCGGGTATGGCAGATGATGAATCTGAAATCGAACCGGGT
ACCCAGGCGACCCTGCTGTTAGATGAGCAGGGGATTGTGCAAAAAATTAATACAAGTAGTAAAGTTACCACGTTAAACGG
CGTCCCATTTCAGATTGCTAAAACTGATTTACAAAAAGCATTATGGCTGGAAGGTTATGAAAGTGGTGACGAGTCTGAAT
TAAAACGTTATTCAGTTGACCATGATGCAACTATCATAGAAGCAGATGGGACAGAAGTACAAATTGCACCAGTTGATGTC
CAATTCCAATCTGCTAGTTTAATTAATCGGATGCTGACTAACTTTGCGGGCCCATTTAATAATTTCATCTTGGCAATTGT
TGCTTTTGCACTTTTTGCCTTTCTAAATGGCGGAGTGCCACAAAATAAGGCAATTATCGGCACAGTCATGCCCAACTCTG
CGGCGCAAAAAGCAGGGCTTAAGCCTAACGATCATATCGTCAAAGTGGCCGGGCAAAAAGTGACGACGTTTACTGATTTT
AGTCAGATAATTACGAAATATCCGAATCATGCGGTTAGCTTACAAATTAGCCGCGCAACTAAAATGAAGACACTACAAGT
AACACCAAAAGCTGTAAAAACCGATGGTCAAAAGCAAAAGGTTGGCCAACTGGGAGTAACCGCTGCACTTAACCAACACG
TGGGGGCTAAGTTACAATACGGATTCACCCAAGCATGGACGAATGCCAGTCAGATTTTTAAAATTCTGGGCTCCTTTTTA
ACCGGTGGCTTTTCCTTGAATAAATTAGCCGGTCCGGTCGGTATGTATTCGATGACGACTCAATTTGCCAGCCAGGGTTT
TACGATGTTGGTTTATTTCTTAGCATTCTTGTCGATTAACTTGGGAATTATGAATTTAATTCCGATTCCAGCACTCGATG
GTGGGAAATTAGTGATTAACGTGATTGAAGCACTACGTGGCAAACCAATTTCACCTGAAAAAGAAGGGATTGTCACCCTT
GTTGGGGTTGGTATCATGGTCGTCTTAATGGTCTTAGTGACCTGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-409)

PDZ domain (PDZ_6)

(206-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.465

100

0.487
  eeP Streptococcus thermophilus LMG 18311

47.465

100

0.487

Multiple sequence alignment