Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | F7R60_RS17715 | Genome accession | NZ_CP044519 |
| Coordinates | 3695776..3696249 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214059.1 | Uniprot ID | A0A009PK04 |
| Organism | Acinetobacter baumannii strain 29FS20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3690776..3701249
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7R60_RS17700 (F7R60_17895) | pilX | 3693405..3694223 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| F7R60_RS17705 (F7R60_17900) | pilW | 3694220..3695221 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| F7R60_RS17710 (F7R60_17905) | pilV | 3695222..3695782 (-) | 561 | WP_086300325.1 | type IV pilus modification protein PilV | Machinery gene |
| F7R60_RS17715 (F7R60_17910) | fimU | 3695776..3696249 (-) | 474 | WP_001214059.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| F7R60_RS17720 (F7R60_17915) | ispH | 3696419..3697369 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| F7R60_RS17725 (F7R60_17920) | gmk | 3697492..3698121 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| F7R60_RS17730 (F7R60_17925) | rpoZ | 3698194..3698472 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| F7R60_RS17735 (F7R60_17930) | - | 3698511..3698641 (+) | 131 | Protein_3474 | hypothetical protein | - |
| F7R60_RS17740 (F7R60_17935) | - | 3698681..3700786 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.47 Da Isoelectric Point: 9.3085
>NTDB_id=390805 F7R60_RS17715 WP_001214059.1 3695776..3696249(-) (fimU) [Acinetobacter baumannii strain 29FS20]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=390805 F7R60_RS17715 WP_001214059.1 3695776..3696249(-) (fimU) [Acinetobacter baumannii strain 29FS20]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACTCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACTCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |