Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   F7R97_RS03170 Genome accession   NZ_CP044517
Coordinates   681252..681662 (+) Length   136 a.a.
NCBI ID   WP_033853185.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 31FS3-2     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 676252..686662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7R97_RS03155 (F7R97_03190) - 677241..679547 (+) 2307 WP_000259109.1 RelA/SpoT family protein -
  F7R97_RS03160 (F7R97_03195) - 679592..680365 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  F7R97_RS03165 (F7R97_03200) mazG 680477..681283 (+) 807 WP_000359489.1 nucleoside triphosphate pyrophosphohydrolase -
  F7R97_RS03170 (F7R97_03205) comEA 681252..681662 (+) 411 WP_033853185.1 ComEA family DNA-binding protein Machinery gene
  F7R97_RS03175 (F7R97_03210) pcnB 681787..683250 (+) 1464 WP_033853184.1 polynucleotide adenylyltransferase PcnB -
  F7R97_RS03180 (F7R97_03215) folK 683247..683729 (+) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  F7R97_RS03185 (F7R97_03220) panB 683775..684584 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  F7R97_RS03190 (F7R97_03225) panC 684588..685436 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  F7R97_RS03195 (F7R97_03230) rapZ 685459..686310 (+) 852 WP_000821671.1 RNase adapter RapZ -
  F7R97_RS03200 (F7R97_03235) - 686307..686576 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15642.84 Da        Isoelectric Point: 10.3828

>NTDB_id=390734 F7R97_RS03170 WP_033853185.1 681252..681662(+) (comEA) [Acinetobacter baumannii strain 31FS3-2]
MQYSMRFWKNKYFVLISLCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=390734 F7R97_RS03170 WP_033853185.1 681252..681662(+) (comEA) [Acinetobacter baumannii strain 31FS3-2]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAAGTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.059

100

0.971
  comEA Acinetobacter baumannii D1279779

96.324

100

0.963
  comEA Acinetobacter baylyi ADP1

46.847

81.618

0.382

Multiple sequence alignment