Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   F8M43_RS19615 Genome accession   NZ_CP044498
Coordinates   3753699..3753818 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain ms-2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3748699..3758818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS19590 albG 3748862..3749563 (+) 702 WP_038427991.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  F8M43_RS19595 ywhL 3749569..3750942 (-) 1374 WP_038427992.1 YncE family protein -
  F8M43_RS19600 ywhK 3750985..3752340 (-) 1356 WP_038427993.1 YncE family protein -
  F8M43_RS21910 - 3752337..3752567 (-) 231 WP_009968328.1 hypothetical protein -
  F8M43_RS19610 rapF 3752570..3753715 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  F8M43_RS19615 phrF 3753699..3753818 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  F8M43_RS19620 - 3754071..3754550 (+) 480 WP_038427994.1 hypothetical protein -
  F8M43_RS19625 - 3754699..3755487 (+) 789 WP_015714893.1 membrane protein -
  F8M43_RS19630 - 3755474..3756148 (+) 675 WP_015714894.1 hypothetical protein -
  F8M43_RS19635 - 3756158..3756955 (+) 798 WP_236822299.1 hypothetical protein -
  F8M43_RS19640 - 3756958..3757605 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  F8M43_RS19645 - 3757598..3758158 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=390597 F8M43_RS19615 WP_009968329.1 3753699..3753818(+) (phrF) [Bacillus subtilis strain ms-2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=390597 F8M43_RS19615 WP_009968329.1 3753699..3753818(+) (phrF) [Bacillus subtilis strain ms-2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment