Detailed information NTG0390596

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: F8M43_RS19610
• Genome accession: NZ_CP044498
• Coordinates: 3752570..3753715 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ms-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3747570..3758715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F8M43_RS19585	albF	3747585..3748865 (+)	1281	WP_003227558.1	pitrilysin family protein	-
F8M43_RS19590	albG	3748862..3749563 (+)	702	WP_038427991.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
F8M43_RS19595	ywhL	3749569..3750942 (-)	1374	WP_038427992.1	YncE family protein	-
F8M43_RS19600	ywhK	3750985..3752340 (-)	1356	WP_038427993.1	YncE family protein	-
F8M43_RS21910	-	3752337..3752567 (-)	231	WP_009968328.1	hypothetical protein	-
F8M43_RS19610	rapF	3752570..3753715 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
F8M43_RS19615	phrF	3753699..3753818 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
F8M43_RS19620	-	3754071..3754550 (+)	480	WP_038427994.1	hypothetical protein	-
F8M43_RS19625	-	3754699..3755487 (+)	789	WP_015714893.1	membrane protein	-
F8M43_RS19630	-	3755474..3756148 (+)	675	WP_015714894.1	hypothetical protein	-
F8M43_RS19635	-	3756158..3756955 (+)	798	WP_236822299.1	hypothetical protein	-
F8M43_RS19640	-	3756958..3757605 (+)	648	WP_015714896.1	ABC transporter ATP-binding protein	-
F8M43_RS19645	-	3757598..3758158 (+)	561	WP_015714897.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=390596 F8M43_RS19610 WP_029318693.1 3752570..3753715(+) (rapF) [Bacillus subtilis strain ms-2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=390596 F8M43_RS19610 WP_029318693.1 3752570..3753715(+) (rapF) [Bacillus subtilis strain ms-2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGAATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTTCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGTTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATCTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATACCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572