Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NLA_RS02425 Genome accession   NC_014752
Coordinates   434591..435235 (+) Length   214 a.a.
NCBI ID   WP_003709928.1    Uniprot ID   E4ZBH0
Organism   Neisseria lactamica 020-06     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 429591..440235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLA_RS02405 (NLA_4530) putP 429771..431297 (-) 1527 WP_013448487.1 sodium/proline symporter PutP -
  NLA_RS02410 (NLA_4540) - 431778..432098 (+) 321 WP_013448488.1 accessory factor UbiK family protein -
  NLA_RS02415 (NLA_4550) comM 432112..433608 (+) 1497 WP_013448489.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NLA_RS02420 (NLA_4560) ftsN 433719..434588 (+) 870 WP_171007432.1 cell division protein FtsN -
  NLA_RS02425 (NLA_4570) dsbA1 434591..435235 (+) 645 WP_003709928.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NLA_RS02430 (NLA_4580) - 435269..436090 (+) 822 WP_003709929.1 undecaprenyl-diphosphate phosphatase -
  NLA_RS02450 (NLA_4590) - 437231..438379 (-) 1149 WP_013448490.1 class I SAM-dependent methyltransferase -
  NLA_RS02455 (NLA_4600) mraZ 438727..439182 (+) 456 WP_003709938.1 division/cell wall cluster transcriptional repressor MraZ -
  NLA_RS02460 (NLA_4610) rsmH 439179..440138 (+) 960 WP_013448491.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23814.80 Da        Isoelectric Point: 9.7107

>NTDB_id=39056 NLA_RS02425 WP_003709928.1 434591..435235(+) (dsbA1) [Neisseria lactamica 020-06]
MKLKHLLPLLLSAVLSAQAYALTEGEDYIVLDKPVPQQQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWRPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKVHLEDRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGIHTIKELLAKVRAERKLSNHPVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=39056 NLA_RS02425 WP_003709928.1 434591..435235(+) (dsbA1) [Neisseria lactamica 020-06]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCACAGGCATATGCCCTGACGGAAGGGGAAGA
CTATATTGTTTTGGATAAGCCTGTCCCGCAGCAACAATCGGGAAAAATCGAAGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGACCCCTTGTTATTGAAGCTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAACAC
GTGGTTTGGCGGCCTGAAATGCTCGGATTGGCCAGAATGGCGGCCGCCGTCAATTTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAGAAGGTTCATTTGGAAGACAGGGCGGTGGCCGGAAAATGGGCTTTGTCGC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATATGGTATTGACAGTACACCAACCGTTATTGTCGGTGGGAAATATCGCGTCATCTTCAATAATGGCTT
TGATGGCGGAATCCATACCATTAAAGAATTGCTTGCCAAAGTCAGGGCGGAGCGCAAACTGTCAAACCATCCTGTGCAAA
AATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E4ZBH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.08

87.383

0.481
  dsbA2 Neisseria meningitidis MC58

50.811

86.449

0.439

Multiple sequence alignment