Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FSA28_RS07605 Genome accession   NZ_CP044495
Coordinates   1550036..1551037 (-) Length   333 a.a.
NCBI ID   WP_002266631.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1545036..1556037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS07580 (FSA28_1287) - 1545072..1545713 (-) 642 WP_002291006.1 hypothetical protein -
  FSA28_RS07585 - 1545707..1545905 (-) 199 Protein_1422 hypothetical protein -
  FSA28_RS07590 (FSA28_1288) - 1545984..1547318 (-) 1335 WP_002264974.1 glycosyltransferase family 4 protein -
  FSA28_RS07595 (FSA28_1289) - 1547320..1548318 (-) 999 WP_002270493.1 glycosyltransferase -
  FSA28_RS07600 (FSA28_1290) - 1548428..1549888 (-) 1461 WP_002266174.1 alpha-amylase -
  FSA28_RS07605 (FSA28_1291) ccpA 1550036..1551037 (-) 1002 WP_002266631.1 catabolite control protein A Regulator
  FSA28_RS07610 (FSA28_1292) - 1551200..1552279 (+) 1080 WP_088741833.1 Xaa-Pro peptidase family protein -
  FSA28_RS07615 (FSA28_1293) - 1552395..1552976 (-) 582 WP_002270491.1 CDP-archaeol synthase -
  FSA28_RS07620 (FSA28_1294) - 1553103..1553873 (-) 771 WP_002291008.1 carbonic anhydrase -
  FSA28_RS07625 (FSA28_1295) celB 1554139..1555497 (-) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  FSA28_RS07630 (FSA28_1296) - 1555513..1556031 (-) 519 WP_002291010.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36643.92 Da        Isoelectric Point: 6.8583

>NTDB_id=390449 FSA28_RS07605 WP_002266631.1 1550036..1551037(-) (ccpA) [Streptococcus mutans strain UA140]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVTEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=390449 FSA28_RS07605 WP_002266631.1 1550036..1551037(-) (ccpA) [Streptococcus mutans strain UA140]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATAGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGTGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTACTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGATTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.679

100

0.787

  ccpA Streptococcus pneumoniae D39

76.276

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment