Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FSA40_RS07395 Genome accession   NZ_CP044493
Coordinates   1496757..1497758 (-) Length   333 a.a.
NCBI ID   WP_002264971.1    Uniprot ID   -
Organism   Streptococcus mutans strain MD     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1491757..1502758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS07370 (FSA40_1484) - 1491801..1492442 (-) 642 WP_002268572.1 hypothetical protein -
  FSA40_RS07375 - 1492436..1492627 (-) 192 WP_002266172.1 hypothetical protein -
  FSA40_RS07380 - 1492706..1494039 (-) 1334 Protein_1387 glycosyltransferase family 4 protein -
  FSA40_RS07385 (FSA40_1487) - 1494041..1495039 (-) 999 WP_002278505.1 glycosyltransferase -
  FSA40_RS07390 (FSA40_1488) - 1495149..1496609 (-) 1461 WP_002278111.1 alpha-amylase -
  FSA40_RS07395 (FSA40_1489) ccpA 1496757..1497758 (-) 1002 WP_002264971.1 catabolite control protein A Regulator
  FSA40_RS07400 (FSA40_1490) - 1497921..1499000 (+) 1080 WP_002280310.1 Xaa-Pro peptidase family protein -
  FSA40_RS07405 (FSA40_1491) - 1499116..1499697 (-) 582 WP_002262795.1 CDP-archaeol synthase -
  FSA40_RS07410 (FSA40_1492) - 1499824..1500594 (-) 771 WP_002268260.1 carbonic anhydrase -
  FSA40_RS07415 (FSA40_1493) celB 1500859..1502217 (-) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  FSA40_RS07420 (FSA40_1494) - 1502233..1502751 (-) 519 WP_151416392.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36647.91 Da        Isoelectric Point: 6.8583

>NTDB_id=390380 FSA40_RS07395 WP_002264971.1 1496757..1497758(-) (ccpA) [Streptococcus mutans strain MD]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPFIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=390380 FSA40_RS07395 WP_002264971.1 1496757..1497758(-) (ccpA) [Streptococcus mutans strain MD]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTTAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAACATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCTTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment