Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FSA31_RS07155 Genome accession   NZ_CP044492
Coordinates   1466587..1467588 (-) Length   333 a.a.
NCBI ID   WP_002284646.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1461587..1472588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS07130 (FSA31_1414) - 1461630..1462271 (-) 642 WP_002266171.1 hypothetical protein -
  FSA31_RS07135 - 1462265..1462456 (-) 192 WP_002266172.1 hypothetical protein -
  FSA31_RS07140 (FSA31_1415) - 1462535..1463869 (-) 1335 WP_002278504.1 glycosyltransferase family 4 protein -
  FSA31_RS07145 (FSA31_1416) - 1463871..1464869 (-) 999 WP_002284645.1 glycosyltransferase -
  FSA31_RS07150 (FSA31_1417) - 1464979..1466439 (-) 1461 WP_002270492.1 alpha-amylase -
  FSA31_RS07155 (FSA31_1418) ccpA 1466587..1467588 (-) 1002 WP_002284646.1 catabolite control protein A Regulator
  FSA31_RS07160 (FSA31_1419) - 1467751..1468830 (+) 1080 WP_002268574.1 Xaa-Pro peptidase family protein -
  FSA31_RS07165 (FSA31_1420) - 1468946..1469527 (-) 582 WP_002284647.1 CDP-archaeol synthase -
  FSA31_RS07170 (FSA31_1421) - 1469654..1470424 (-) 771 WP_019802784.1 carbonic anhydrase -
  FSA31_RS07175 (FSA31_1422) celB 1470690..1472048 (-) 1359 WP_002284649.1 PTS cellobiose transporter subunit IIC -
  FSA31_RS07180 (FSA31_1423) - 1472064..1472582 (-) 519 WP_002270489.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36670.94 Da        Isoelectric Point: 6.8583

>NTDB_id=390308 FSA31_RS07155 WP_002284646.1 1466587..1467588(-) (ccpA) [Streptococcus mutans strain T8]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPN
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVTEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=390308 FSA31_RS07155 WP_002284646.1 1466587..1467588(-) (ccpA) [Streptococcus mutans strain T8]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTATTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAAT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTACTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGATTCTACTATTGCACTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment