Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FSA31_RS02010 Genome accession   NZ_CP044492
Coordinates   407142..408176 (+) Length   344 a.a.
NCBI ID   WP_002284862.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 402142..413176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS01985 (FSA31_0393) tsaE 403475..403918 (+) 444 WP_019802615.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FSA31_RS01990 (FSA31_0394) brpA 404249..405469 (+) 1221 WP_002267779.1 biofilm formation/cell division transcriptional regulator BrpA -
  FSA31_RS01995 (FSA31_0395) - 405649..405933 (-) 285 WP_002262610.1 hypothetical protein -
  FSA31_RS02000 (FSA31_0396) - 405930..406349 (-) 420 WP_002262609.1 HIT family protein -
  FSA31_RS02005 (FSA31_0397) pptA 406414..407139 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS02010 (FSA31_0398) pptB 407142..408176 (+) 1035 WP_002284862.1 ABC transporter permease Regulator
  FSA31_RS02015 (FSA31_0399) ccrZ 408235..409017 (+) 783 WP_002273963.1 cell cycle regulator CcrZ -
  FSA31_RS02020 (FSA31_0400) trmB 409027..409662 (+) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FSA31_RS02030 (FSA31_0402) rimP 409934..410425 (+) 492 WP_002267543.1 ribosome maturation factor RimP -
  FSA31_RS02035 (FSA31_0403) nusA 410461..411654 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  FSA31_RS02040 (FSA31_0404) - 411672..411968 (+) 297 WP_002263922.1 YlxR family protein -
  FSA31_RS02045 (FSA31_0405) - 411961..412263 (+) 303 WP_002262601.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40618.05 Da        Isoelectric Point: 10.6270

>NTDB_id=390280 FSA31_RS02010 WP_002284862.1 407142..408176(+) (pptB) [Streptococcus mutans strain T8]
MKAIFTKRRFHFINQCSRYLRYVFNDHFVLVLIFLLGFLMVQYSQLLKHFPANHWPIMFILALVVLTLLFWGNIATYLEP
ADQQFLLVREKDIVALIQKAKRRALFFWGTWQTLLLLILAPLFLRLGLALFSFLFLLLFLLFLKGLIIEKKSRAFLKQKG
LNWDHALNQEKKRQQAILKFFSLFTNVKGISNSVKRRAYLDFGTKLLPKETHKAWTNLYLRAFLRSGDYLGLTFRLGFLS
LLSLLFIDNPLMSAGLALLFNYLLLFQLLALYKHYDYQYLTALFPISKAEKKANLKQLLRVILYFLTAVEFCFSFSWQKT
IILLLAMLCLNEVYLPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=390280 FSA31_RS02010 WP_002284862.1 407142..408176(+) (pptB) [Streptococcus mutans strain T8]
ATGAAGGCAATTTTTACAAAAAGACGATTCCATTTTATCAATCAATGCAGTCGATACCTTCGCTATGTTTTTAATGATCA
TTTTGTTTTAGTATTGATTTTTTTACTAGGTTTTCTTATGGTACAGTATAGCCAACTGTTAAAACATTTTCCGGCTAATC
ATTGGCCTATCATGTTTATTTTAGCGTTAGTTGTCTTGACCTTACTATTTTGGGGAAATATAGCGACTTATTTGGAACCA
GCGGATCAGCAATTTCTTTTGGTCAGGGAAAAGGACATTGTTGCTTTAATCCAAAAAGCTAAAAGACGAGCTCTTTTCTT
TTGGGGAACTTGGCAGACACTCTTGCTTCTTATTTTGGCACCTCTTTTTTTACGTTTGGGACTGGCACTTTTTTCTTTTC
TTTTTTTGCTCCTTTTTTTGCTCTTTTTAAAAGGATTGATCATTGAAAAAAAAAGCAGAGCTTTTTTGAAGCAGAAAGGA
CTGAACTGGGATCATGCTCTTAATCAAGAGAAAAAACGGCAGCAGGCAATTTTAAAATTCTTTTCACTTTTTACCAATGT
TAAGGGAATTTCAAACAGCGTTAAGCGACGGGCTTATTTGGATTTTGGGACAAAATTATTGCCGAAGGAGACTCATAAAG
CGTGGACTAATCTTTATTTAAGAGCTTTTTTACGCAGTGGCGATTATTTAGGACTGACCTTTCGTTTAGGTTTTTTAAGT
CTTTTAAGTCTTCTTTTTATTGATAATCCTTTAATGTCAGCAGGTTTAGCGCTCCTTTTTAATTACCTCTTGCTTTTTCA
ATTGTTGGCTCTTTATAAACATTATGATTATCAATATTTAACAGCCCTTTTTCCCATTTCAAAAGCGGAGAAGAAGGCTA
ATTTGAAACAGTTATTGCGTGTTATTCTATATTTTTTAACAGCTGTTGAATTTTGTTTTAGCTTTTCATGGCAAAAGACA
ATTATTTTACTTTTGGCAATGCTTTGTCTCAATGAAGTTTATCTGCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

51.163

100

0.512

  pptB Streptococcus thermophilus LMD-9

50.581

100

0.506


Multiple sequence alignment