Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FSA31_RS02005 Genome accession   NZ_CP044492
Coordinates   406414..407139 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain T8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 401414..412139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS01980 (FSA31_0392) - 401917..403347 (+) 1431 WP_002284864.1 NCS2 family permease -
  FSA31_RS01985 (FSA31_0393) tsaE 403475..403918 (+) 444 WP_019802615.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FSA31_RS01990 (FSA31_0394) brpA 404249..405469 (+) 1221 WP_002267779.1 biofilm formation/cell division transcriptional regulator BrpA -
  FSA31_RS01995 (FSA31_0395) - 405649..405933 (-) 285 WP_002262610.1 hypothetical protein -
  FSA31_RS02000 (FSA31_0396) - 405930..406349 (-) 420 WP_002262609.1 HIT family protein -
  FSA31_RS02005 (FSA31_0397) pptA 406414..407139 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS02010 (FSA31_0398) pptB 407142..408176 (+) 1035 WP_002284862.1 ABC transporter permease Regulator
  FSA31_RS02015 (FSA31_0399) ccrZ 408235..409017 (+) 783 WP_002273963.1 cell cycle regulator CcrZ -
  FSA31_RS02020 (FSA31_0400) trmB 409027..409662 (+) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FSA31_RS02030 (FSA31_0402) rimP 409934..410425 (+) 492 WP_002267543.1 ribosome maturation factor RimP -
  FSA31_RS02035 (FSA31_0403) nusA 410461..411654 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  FSA31_RS02040 (FSA31_0404) - 411672..411968 (+) 297 WP_002263922.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=390279 FSA31_RS02005 WP_002262608.1 406414..407139(+) (pptA) [Streptococcus mutans strain T8]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=390279 FSA31_RS02005 WP_002262608.1 406414..407139(+) (pptA) [Streptococcus mutans strain T8]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAAATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment