Detailed information NTG0039016

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NMBM01240355_RS01505
• Genome accession: NC_017517
• Coordinates: 279233..279817 (-)
• Length: 194 a.a.
• NCBI ID: WP_002228925.1
• Uniprot ID: -
• Organism: Neisseria meningitidis M01-240355
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 274233..284817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMBM01240355_RS01475 (NMBM01240355_0264)	-	274660..274959 (+)	300	WP_002215645.1	DUF2818 family protein	-
NMBM01240355_RS01480 (NMBM01240355_0265)	-	275068..275964 (-)	897	WP_014581741.1	polyprenyl synthetase family protein	-
NMBM01240355_RS01485 (NMBM01240355_0266)	-	275948..276259 (-)	312	WP_306171314.1	exodeoxyribonuclease VII small subunit	-
NMBM01240355_RS01490 (NMBM01240355_0267)	rsgA	276286..277209 (-)	924	WP_002228928.1	ribosome small subunit-dependent GTPase A	-
NMBM01240355_RS01495 (NMBM01240355_0268)	-	277214..279070 (-)	1857	WP_002228937.1	ABC transporter ATP-binding protein	-
NMBM01240355_RS15595	-	279096..279233 (-)	138	WP_002231623.1	hypothetical protein	-
NMBM01240355_RS01505 (NMBM01240355_0269)	ruvA	279233..279817 (-)	585	WP_002228925.1	Holliday junction branch migration protein RuvA	Machinery gene
NMBM01240355_RS01510 (NMBM01240355_0270)	-	279899..280225 (-)	327	WP_002224271.1	PepSY domain-containing protein	-
NMBM01240355_RS01515 (NMBM01240355_0271)	-	280287..281006 (-)	720	WP_002224272.1	septal ring lytic transglycosylase RlpA family protein	-
NMBM01240355_RS01520 (NMBM01240355_0272)	trmL	281134..281598 (-)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NMBM01240355_RS01525 (NMBM01240355_0273)	-	281663..282388 (-)	726	WP_014581742.1	ComF family protein	-
NMBM01240355_RS01530 (NMBM01240355_0274)	bioH	282387..283130 (+)	744	WP_014581743.1	pimeloyl-ACP methyl ester esterase BioH	-
NMBM01240355_RS01535 (NMBM01240355_0275)	-	283132..283917 (+)	786	WP_002243887.1	hypothetical protein	-
NMBM01240355_RS01540 (NMBM01240355_0276)	-	284105..284374 (+)	270	WP_002221591.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20686.96 Da
• Isoelectric Point: 6.4967

>NTDB_id=39016 NMBM01240355_RS01505 WP_002228925.1 279233..279817(-) (ruvA) [Neisseria meningitidis M01-240355]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=39016 NMBM01240355_RS01505 WP_002228925.1 279233..279817(-) (ruvA) [Neisseria meningitidis M01-240355]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCAGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACACTGCTTGCA
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGAAAGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Streptococcus pneumoniae TIGR4	37	100	0.381
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371