Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FSC09_RS11965 | Genome accession | NZ_CP044455 |
| Coordinates | 2464293..2464613 (-) | Length | 106 a.a. |
| NCBI ID | WP_228722415.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain B18 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2459293..2469613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC09_RS11935 (FSC09_11985) | - | 2459350..2459619 (-) | 270 | WP_034598158.1 | HPr family phosphocarrier protein | - |
| FSC09_RS11940 (FSC09_11990) | rapZ | 2459616..2460467 (-) | 852 | WP_005182418.1 | RNase adapter RapZ | - |
| FSC09_RS11945 (FSC09_11995) | panC | 2460495..2461340 (-) | 846 | WP_005182413.1 | pantoate--beta-alanine ligase | - |
| FSC09_RS11950 (FSC09_12000) | panB | 2461344..2462153 (-) | 810 | WP_163146109.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| FSC09_RS11955 (FSC09_12005) | folK | 2462199..2462687 (-) | 489 | WP_160241605.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| FSC09_RS11960 (FSC09_12010) | pcnB | 2462684..2464156 (-) | 1473 | WP_163146110.1 | polynucleotide adenylyltransferase PcnB | - |
| FSC09_RS11965 (FSC09_12015) | comEA | 2464293..2464613 (-) | 321 | WP_228722415.1 | ComEA family DNA-binding protein | Machinery gene |
| FSC09_RS11970 (FSC09_12020) | mazG | 2464717..2465478 (-) | 762 | WP_005182408.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| FSC09_RS11975 (FSC09_12025) | - | 2465579..2466355 (+) | 777 | WP_016659529.1 | SDR family oxidoreductase | - |
| FSC09_RS11980 (FSC09_12030) | der | 2466421..2467833 (-) | 1413 | WP_005182406.1 | ribosome biogenesis GTPase Der | - |
| FSC09_RS11985 (FSC09_12035) | bamB | 2468008..2469156 (-) | 1149 | WP_163146112.1 | outer membrane protein assembly factor BamB | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11719.33 Da Isoelectric Point: 10.6219
>NTDB_id=390130 FSC09_RS11965 WP_228722415.1 2464293..2464613(-) (comEA) [Acinetobacter indicus strain B18]
MQAENYDARYLQWKAEQEAIDARLSPSASTKTSQPRSASAGSSEKINLNMATAAQLQQLSGVGQKKAEAIIEYRNRHGKF
KRIEDLQLVKGIGPALLAKNRHRLGI
MQAENYDARYLQWKAEQEAIDARLSPSASTKTSQPRSASAGSSEKINLNMATAAQLQQLSGVGQKKAEAIIEYRNRHGKF
KRIEDLQLVKGIGPALLAKNRHRLGI
Nucleotide
Download Length: 321 bp
>NTDB_id=390130 FSC09_RS11965 WP_228722415.1 2464293..2464613(-) (comEA) [Acinetobacter indicus strain B18]
GTGCAGGCAGAAAATTATGATGCGCGTTATCTGCAATGGAAGGCTGAACAAGAGGCGATTGATGCCCGCTTAAGCCCGTC
GGCTTCTACGAAGACTTCCCAACCCCGTTCAGCTAGCGCAGGCAGTAGTGAAAAAATTAATCTGAATATGGCAACAGCCG
CGCAATTACAGCAATTATCTGGCGTGGGACAAAAGAAGGCGGAAGCTATTATTGAGTACCGCAATCGGCATGGAAAATTC
AAACGGATTGAAGATTTACAGTTAGTCAAAGGGATTGGACCGGCATTATTGGCCAAAAACCGGCACCGGCTGGGTATTTA
A
GTGCAGGCAGAAAATTATGATGCGCGTTATCTGCAATGGAAGGCTGAACAAGAGGCGATTGATGCCCGCTTAAGCCCGTC
GGCTTCTACGAAGACTTCCCAACCCCGTTCAGCTAGCGCAGGCAGTAGTGAAAAAATTAATCTGAATATGGCAACAGCCG
CGCAATTACAGCAATTATCTGGCGTGGGACAAAAGAAGGCGGAAGCTATTATTGAGTACCGCAATCGGCATGGAAAATTC
AAACGGATTGAAGATTTACAGTTAGTCAAAGGGATTGGACCGGCATTATTGGCCAAAAACCGGCACCGGCTGGGTATTTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baylyi ADP1 |
50.962 |
98.113 |
0.5 |
| comEA | Acinetobacter baumannii strain A118 |
43.119 |
100 |
0.443 |
| comEA | Acinetobacter baumannii D1279779 |
38.889 |
100 |
0.396 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
47.619 |
79.245 |
0.377 |