Detailed information NTG0390128

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: FSC09_RS09905
• Genome accession: NZ_CP044455
• Coordinates: 2051134..2053536 (-)
• Length: 800 a.a.
• NCBI ID: WP_171524632.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain B18
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2046454..2054305	2051134..2053536	within	0

Gene organization within MGE regions

Location: 2046454..2054305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC09_RS09880 (FSC09_09905)	purM	2046454..2047524 (+)	1071	WP_005176576.1	phosphoribosylformylglycinamidine cyclo-ligase	-
FSC09_RS09885 (FSC09_09910)	purN	2047531..2048160 (+)	630	WP_016660003.1	phosphoribosylglycinamide formyltransferase	-
FSC09_RS09890 (FSC09_09915)	-	2048237..2049040 (-)	804	WP_005176572.1	alpha/beta fold hydrolase	-
FSC09_RS09895 (FSC09_09920)	sppA	2049037..2050062 (-)	1026	WP_163145984.1	signal peptide peptidase SppA	-
FSC09_RS09900 (FSC09_09925)	-	2050193..2051137 (+)	945	WP_163145985.1	lysophospholipid acyltransferase family protein	-
FSC09_RS09905 (FSC09_09930)	comA/comEC	2051134..2053536 (-)	2403	WP_171524632.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FSC09_RS09910 (FSC09_09935)	lolD	2053622..2054305 (-)	684	WP_005176563.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 91482.51 Da
• Isoelectric Point: 7.6736

>NTDB_id=390128 FSC09_RS09905 WP_171524632.1 2051134..2053536(-) (comA/comEC) [Acinetobacter indicus strain B18]
MFKIMGAGWIVGIACMGKTLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFLLGLNFAQNQLQER
LIFRELTRQPAEVVVYVQQINQLGSSQLRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLPAHSFAVPGAFDV
EQWYLQQNIMSGFQVQSIVELTESELYRLGFGAHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHPGLILALLTGDKS
LLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYAQLPRSYLLLLPFMGCVFVYCAYVGFEIPAL
RTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSAAFWLSYGACFVLLRIYQTLRQQPVHPQQTLMQKLWQG
FRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVTVPLDILAGLSFYLAEPLSQLLFQLNDLALSLLLGC
LQLLDLLFVPQLIPVALSPPMLLSLVLGLMILFLPAGLVPKAWSALCLLPLLFQDQFSRQVELSVLDVGQGQAIFLRYRE
HSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQVYANAQLEVHPDSRFDYC
RQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQDYPDLKVDVLVLG
HHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVKARLNALKIPLWQTAQQGSIQFYPTENEVLPYRHTRVWLRRD

Nucleotide

• Length: 2403 bp

>NTDB_id=390128 FSC09_RS09905 WP_171524632.1 2051134..2053536(-) (comA/comEC) [Acinetobacter indicus strain B18]
ATGTTCAAAATCATGGGTGCCGGCTGGATTGTAGGTATTGCCTGTATGGGCAAAACGCTATGGCCGATGCTGGATTTCCC
GCTCTGGTTGTCAGGCCTGTTACTGATCATTCTGCTGTTACAGCAAATAGCTGCTTTACATTGGTCCCATCTGGGCATCC
AATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTGTTGGGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGG
TTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGTCTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCA
GCTCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGGTGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAAC
TACAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCGGCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATGTA
GAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGTCCAGTCGATTGTGGAACTGACTGAATCGGAACTGTA
TCGGCTGGGATTTGGGGCACATTTAAGACAGCATCAGCAACTCTGGCCGCAATTTAAATTGTGGATCGAAACACAGCGTT
TACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCCGGCTTAATACTGGCACTGCTGACTGGCGATAAAAGT
TTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGATGAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCT
GATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCACTCGCTATTGGCCCGAATTATATGCGCAATTGCCCC
GAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTATATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTC
AGGACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCTAAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGG
TAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGTCGGCGGCATTCTGGCTGTCTTATGGCGCCTGCTTTG
TGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCATCCGCAGCAGACGTTGATGCAGAAATTGTGGCAGGGC
TTCCGGCTGCTATTTGAATCGCAATGGAAAATTTTTATTGCGCTGTTTCCGCTGATGATCATCTTCTTCAAGCAGATTGC
CTGGATTGCGCCGCTGAGTAATCTATTGGCCATTCCCTGGATCGGTCTGGTGACTGTACCGCTGGATATTCTGGCCGGTT
TAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAGCTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGT
TTGCAGTTGCTGGATTTGCTGTTTGTGCCGCAACTGATTCCGGTTGCGCTGAGCCCACCGATGCTGCTGAGTCTGGTGCT
GGGACTGATGATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAGCCTGGTCAGCGCTGTGCTTGTTGCCTTTGCTGTTTC
AGGATCAGTTTTCTCGGCAGGTGGAACTTAGTGTGCTGGATGTTGGGCAAGGGCAGGCGATCTTTTTACGCTATCGTGAA
CACAGTATGATGATTGATATGGGCGGTCATTATGATGAACAGAAATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTT
AAGTGTCAAAGGCGTGCAGCAGTTAGATTATTTATGGTTGACCCATCTGGATCAGGATCATAGCGGTGCCTATCAGACCT
TAAAGCCACAGTTGCAGGTGCAACAGGTCTATGCCAATGCTCAGCTTGAGGTACATCCGGACAGTCGCTTTGACTATTGC
CGGCAGGGACAGCAATGGCAGTGGCAACCGGGCATTCAGATTCAGGTACTCTCTCCGAAACCGGAGCAGTTAAATCCTGT
AGAACAGCAGAAAAATGAAAGTTCCTGTGTGCTGCTGGTTGAGTTTGCACAAGCTCAGCCTTACTCACGCTTTTTATTGA
TGGGCGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGATTATCCGGATTTAAAAGTGGATGTGCTGGTGCTCGGC
CATCATGGTAGCCGGCACAGTTCATCTTACCAGTTTTTAAAACAGCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCT
GAATAACCGTTATGGCCATCCGAGCACGCAGGTAAAAGCCCGACTGAACGCCTTAAAAATTCCGTTATGGCAGACAGCGC
AGCAGGGCAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTACCGTACCGGCATACGCGGGTTTGGCTGCGGCGCGAT
TAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (547-657)

• Competence protein (Competence) (234-515)

• Domain of unknown function (DUF4131) (DUF4131) (25-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	47.917	100	0.489
comA/comEC	Acinetobacter baylyi ADP1	48.089	100	0.488
comA/comEC	Acinetobacter baumannii strain A118	47.426	100	0.484