Detailed information NTG0389962

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: F7V86_RS04085
• Genome accession: NZ_CP044444
• Coordinates: 774787..775950 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain KC41
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 769787..780950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7V86_RS04055	-	770052..770471 (-)	420	WP_061861586.1	TIGR03826 family flagellar region protein	-
F7V86_RS04060	comFC	770545..771234 (-)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
F7V86_RS04065	-	771240..771524 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
F7V86_RS04070	comFA	771582..772967 (-)	1386	WP_104842867.1	DEAD/DEAH box helicase	Machinery gene
F7V86_RS04075	-	773075..773923 (-)	849	WP_003151387.1	DegV family protein	-
F7V86_RS04080	degU	774021..774710 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
F7V86_RS04085	degS	774787..775950 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
F7V86_RS04090	-	776173..776820 (+)	648	WP_003151384.1	YigZ family protein	-
F7V86_RS04095	-	776825..778018 (+)	1194	WP_151140083.1	LCP family protein	-
F7V86_RS04100	-	778117..779193 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
F7V86_RS04105	tuaH	779325..780521 (-)	1197	WP_071182023.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=389962 F7V86_RS04085 WP_007407484.1 774787..775950(-) (degS) [Bacillus amyloliquefaciens strain KC41]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=389962 F7V86_RS04085 WP_007407484.1 774787..775950(-) (degS) [Bacillus amyloliquefaciens strain KC41]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951