Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BACIH_RS14535 Genome accession   NZ_CP044360
Coordinates   2943310..2945610 (-) Length   766 a.a.
NCBI ID   WP_077411086.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain V167     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2938310..2950610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACIH_RS14495 (BACIH_2953) - 2938770..2939201 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  BACIH_RS14500 (BACIH_2954) - 2939201..2939542 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  BACIH_RS14505 (BACIH_2955) - 2939535..2941016 (+) 1482 WP_041482212.1 Na+/H+ antiporter subunit D -
  BACIH_RS14510 (BACIH_2956) - 2941022..2941498 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  BACIH_RS14515 (BACIH_2957) - 2941498..2941782 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  BACIH_RS14520 (BACIH_2958) mnhG 2941766..2942140 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  BACIH_RS14525 (BACIH_2959) - 2942180..2942563 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  BACIH_RS14530 (BACIH_2960) comA 2942585..2943229 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  BACIH_RS14535 (BACIH_2961) comP 2943310..2945610 (-) 2301 WP_077411086.1 histidine kinase Regulator
  BACIH_RS14540 (BACIH_2962) comX 2945624..2945797 (-) 174 WP_012118314.1 competence pheromone ComX -
  BACIH_RS14545 (BACIH_2963) - 2945812..2946627 (-) 816 WP_191973487.1 polyprenyl synthetase family protein -
  BACIH_RS14550 (BACIH_2964) degQ 2946836..2946976 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BACIH_RS14560 (BACIH_2966) - 2947441..2947782 (+) 342 WP_012118316.1 hypothetical protein -
  BACIH_RS14565 (BACIH_2967) - 2947789..2949012 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  BACIH_RS14570 (BACIH_2968) - 2949142..2950608 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88401.63 Da        Isoelectric Point: 7.2210

>NTDB_id=389690 BACIH_RS14535 WP_077411086.1 2943310..2945610(-) (comP) [Bacillus amyloliquefaciens strain V167]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSYIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWELYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=389690 BACIH_RS14535 WP_077411086.1 2943310..2945610(-) (comP) [Bacillus amyloliquefaciens strain V167]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAATAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCATATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGGTCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTGAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTATATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTGATAGCTTTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCTGTATTCTCATCAATTAGCTGAAACGACAAGTGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTAAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGCCTG
GTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.99

100

0.561


Multiple sequence alignment