Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   F6X58_RS05325 Genome accession   NZ_CP044262
Coordinates   1024050..1024706 (+) Length   218 a.a.
NCBI ID   WP_139454016.1    Uniprot ID   -
Organism   Campylobacter armoricus strain CA639     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1019050..1029706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6X58_RS05300 - 1019151..1020671 (-) 1521 WP_139452140.1 inorganic phosphate transporter -
  F6X58_RS05305 pdxA 1020707..1021816 (-) 1110 WP_139454019.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  F6X58_RS05310 - 1021813..1022580 (-) 768 WP_139454018.1 pyridoxine 5'-phosphate synthase -
  F6X58_RS05315 - 1022637..1023599 (+) 963 WP_139454017.1 Ppx/GppA family phosphatase -
  F6X58_RS05320 - 1023610..1024053 (+) 444 WP_139425528.1 GatB/YqeY domain-containing protein -
  F6X58_RS05325 CJE1441 1024050..1024706 (+) 657 WP_139454016.1 DNA/RNA non-specific endonuclease Regulator
  F6X58_RS05330 - 1024871..1027714 (+) 2844 WP_268906986.1 filamentous hemagglutinin N-terminal domain-containing protein -
  F6X58_RS05335 dnaK 1027739..1029610 (-) 1872 WP_139453457.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26069.10 Da        Isoelectric Point: 9.9866

>NTDB_id=389150 F6X58_RS05325 WP_139454016.1 1024050..1024706(+) (CJE1441) [Campylobacter armoricus strain CA639]
MKNFLTLCALALSSFAYTQYELHPSFKDYFKNCSLLMDKYYYINCYDYNYKGTKAIAYKLKASILNQGHIKKRPKFSEDT
NIPKKYRTYWEDYLRSGYTRGHVVPNQSMNATPQAQLSTFLMSNITPQKKDINAEIWNKIEQRERYLAKKNKELEVLNLV
LYDEKPKRIKNNIAIPSFYVKILKAKNYAECYKVPNNDNFARFDRNYFKENCKKYIKF

Nucleotide


Download         Length: 657 bp        

>NTDB_id=389150 F6X58_RS05325 WP_139454016.1 1024050..1024706(+) (CJE1441) [Campylobacter armoricus strain CA639]
ATGAAAAATTTTCTAACACTTTGTGCTTTAGCTTTAAGTTCTTTTGCTTATACTCAATATGAACTACATCCTAGCTTTAA
AGACTACTTTAAAAATTGTTCTTTACTTATGGATAAATATTATTATATTAATTGTTATGATTATAATTATAAAGGCACTA
AAGCCATAGCTTATAAACTAAAAGCAAGTATTTTAAATCAAGGACACATCAAAAAACGCCCTAAATTTTCAGAAGATACA
AATATACCTAAAAAATACAGAACTTATTGGGAAGATTATCTAAGAAGTGGCTATACAAGAGGGCATGTCGTGCCTAATCA
ATCTATGAATGCAACCCCACAAGCCCAGCTTAGTACTTTTTTAATGAGTAATATCACTCCACAAAAAAAGGATATTAACG
CTGAAATTTGGAATAAAATCGAACAAAGAGAAAGATATTTAGCAAAGAAAAACAAAGAATTAGAGGTGTTAAATTTGGTT
CTTTATGATGAAAAACCAAAACGCATAAAAAACAACATTGCAATACCTAGTTTTTATGTAAAAATACTTAAAGCAAAAAA
CTATGCAGAATGTTATAAAGTCCCAAATAATGATAATTTTGCAAGATTTGATAGAAATTATTTCAAAGAAAATTGCAAAA
AATATATTAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-209)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

63.83

86.239

0.55
  CJE0566 Campylobacter jejuni RM1221

61.702

86.239

0.532

Multiple sequence alignment