Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LPB220_RS10730 Genome accession   NZ_CP044230
Coordinates   2132352..2133113 (+) Length   253 a.a.
NCBI ID   WP_150906770.1    Uniprot ID   A0A5J6LPX6
Organism   Streptococcus sp. LPB0220     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2127352..2138113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPB220_RS10705 (LPB220_10710) comE/comE2 2127863..2128621 (-) 759 WP_003009229.1 response regulator transcription factor Regulator
  LPB220_RS10710 (LPB220_10715) - 2128618..2129958 (-) 1341 WP_150906768.1 GHKL domain-containing protein -
  LPB220_RS10720 (LPB220_10725) rlmH 2130415..2130894 (-) 480 WP_003009233.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LPB220_RS10725 (LPB220_10730) htrA 2131099..2132280 (+) 1182 WP_023920001.1 S1C family serine protease Regulator
  LPB220_RS10730 (LPB220_10735) spo0J 2132352..2133113 (+) 762 WP_150906770.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29372.89 Da        Isoelectric Point: 9.7263

>NTDB_id=389016 LPB220_RS10730 WP_150906770.1 2132352..2133113(+) (spo0J) [Streptococcus sp. LPB0220]
MEKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGERRFRASKIAGLELVPAIIKE
LTDQEMMRQAIIENLQREDLNPIEEAISYQKLVDHGYKHDQIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHA
RVLVPLDEEEQRFWLERIKQDHLNVRTLENKISSRRKQKNKKAKESFLLEEEQRLKKILGTDVTIHSSSQNKGTIQISFS
SLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=389016 LPB220_RS10730 WP_150906770.1 2132352..2133113(+) (spo0J) [Streptococcus sp. LPB0220]
ATGGAAAAATTAGAAAAAATAGCGGTAAAGGACATTCGAACCAATCCTTTCCAACCAAGAAAAGTATTTGATCAAGAAAA
ATTAGAAGAACTGGCTCAGTCAATCAAAGAAAATGGCTTAATTCAACCAATTATTGTCAGAAAATCTCCAATAATTGGTT
TTGAATTGCTTGCAGGTGAAAGACGTTTTAGAGCTTCAAAAATTGCTGGATTAGAGCTTGTTCCTGCGATTATTAAAGAG
TTAACAGATCAAGAAATGATGCGACAAGCCATTATTGAAAATCTTCAACGAGAAGATCTCAATCCAATTGAAGAAGCTAT
CTCCTACCAGAAGCTCGTTGATCATGGCTATAAGCACGACCAAATCGCTCAATTTATGGGGAAATCTAGACCCTATATCA
GCAATATGCTTCGCTTGTTACATCTAGCTCCTTCTGTTCAAGAAGCAGTCATTCAAAATGATATTTCTTCGGCTCACGCG
CGTGTTCTTGTTCCTCTTGATGAAGAAGAGCAGCGCTTTTGGTTGGAGCGAATCAAACAGGATCATTTAAATGTTCGAAC
ATTAGAAAACAAGATCAGTTCAAGAAGAAAACAGAAAAATAAAAAAGCAAAAGAGAGCTTCCTACTAGAAGAGGAACAAC
GATTGAAAAAAATATTAGGAACAGATGTGACGATACACTCCTCTTCTCAAAATAAAGGAACTATCCAAATTTCTTTTTCC
AGTCTTGATGAATACCAACGAATTATCAACAGCCTCAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(144-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5J6LPX6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.012

100

0.49

Multiple sequence alignment