Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   LPB220_RS07925 Genome accession   NZ_CP044230
Coordinates   1528912..1529916 (-) Length   334 a.a.
NCBI ID   WP_150906397.1    Uniprot ID   A0A5J6LNI7
Organism   Streptococcus sp. LPB0220     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1523912..1534916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPB220_RS07905 (LPB220_07910) - 1524991..1526313 (-) 1323 WP_021153617.1 glycosyltransferase family 4 protein -
  LPB220_RS07910 (LPB220_07915) - 1526315..1527313 (-) 999 WP_003008161.1 glycosyltransferase family 4 protein -
  LPB220_RS07915 (LPB220_07920) - 1527416..1528003 (-) 588 WP_021153618.1 class I SAM-dependent methyltransferase -
  LPB220_RS07920 (LPB220_07925) - 1528160..1528750 (+) 591 WP_024055141.1 TetR/AcrR family transcriptional regulator -
  LPB220_RS07925 (LPB220_07930) ccpA 1528912..1529916 (-) 1005 WP_150906397.1 catabolite control protein A Regulator
  LPB220_RS07930 (LPB220_07935) - 1530077..1531159 (+) 1083 WP_021153620.1 M24 family metallopeptidase -
  LPB220_RS07940 (LPB220_07945) - 1531400..1531849 (-) 450 WP_150906398.1 Rrf2 family transcriptional regulator -
  LPB220_RS07945 (LPB220_07950) - 1531962..1532804 (-) 843 WP_150906399.1 metallophosphoesterase family protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37132.22 Da        Isoelectric Point: 6.7730

>NTDB_id=389003 LPB220_RS07925 WP_150906397.1 1528912..1529916(-) (ccpA) [Streptococcus sp. LPB0220]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNNLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTQLVKHNKKIAFVSGPLVDDINGKIRLTGYKEALKAKKLSYSEGLVFESKYRYDEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLSDHGIKVPEDFEIITSDDSQVTRYTRPNLSTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLSHTINQRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=389003 LPB220_RS07925 WP_150906397.1 1528912..1529916(-) (ccpA) [Streptococcus sp. LPB0220]
ATGAATACAGACGATACAGTTACAATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCAACCGTTAGTCGTGTAGT
AAATGGAAATAAAAACGTTAAAGAAAATACACGTAAAAAAGTTTTAGAAGTGATCGAACGCTTGGATTACCGTCCAAATG
CTGTTGCGCGTGGTCTTGCTAGCAAGAAAACCACAACAGTCGGTGTTGTGATTCCAAACATCACGAATAGCTATTTCTCT
ACATTGGCTAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAATATTGTTCTTGCAAATAGCGATGAAGACGATGA
CAAAGAAGTTTCAGTGGTAAATAACCTTTTTTCAAAACAAGTGGATGGGATCATTTTCATGGGCTATCATTTGACAGAAA
AGATTCGCTCAGAATTTTCACGCTCTCGTACGCCAGTTGTTCTTGCTGGTACAGTGGATGTTGAACACCAATTACCAAGT
GTCAATATCGACTACAAGCAAGCGACTGTGGATGCTGTTACACAGTTGGTAAAACACAACAAGAAAATTGCTTTTGTAAG
TGGCCCATTGGTGGATGATATCAATGGAAAAATTCGTTTGACAGGCTACAAAGAAGCTTTGAAAGCGAAAAAATTGAGCT
ACAGCGAAGGACTTGTGTTTGAATCCAAGTACCGTTACGATGAAGGTTATAACTTGGCAGAACGCATCATTGCGTCAAAA
GCAACAGCTGCCTTTGTAACAGGGGATGAATTGGCTGCAGGTCTCTTGAACGGCTTGTCTGATCACGGTATCAAAGTACC
AGAAGACTTTGAAATCATTACTAGTGATGATTCACAAGTAACTCGTTACACGCGTCCAAATCTATCAACGATTGGCCAAC
CCTTGTATGACCTTGGTGCGATTAGTATGCGTATGTTGACCAAGATCATGCACAAAGAAGAGTTGGAAGAACGCGAAGTA
CTGTTGTCTCATACGATCAACCAACGTGGAACGACCAAAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5J6LNI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.719

100

0.907
  ccpA Streptococcus pneumoniae D39

84.731

100

0.847
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56

Multiple sequence alignment