Detailed information NTG0038870

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NMBM04240196_RS01545
• Genome accession: NC_017515
• Coordinates: 274504..275088 (-)
• Length: 194 a.a.
• NCBI ID: WP_014581312.1
• Uniprot ID: -
• Organism: Neisseria meningitidis M04-240196
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 269504..280088

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMBM04240196_RS01515 (NMBM04240196_0266)	-	269933..270232 (+)	300	WP_014581309.1	DUF2818 family protein	-
NMBM04240196_RS01520 (NMBM04240196_0267)	-	270341..271237 (-)	897	WP_014581310.1	polyprenyl synthetase family protein	-
NMBM04240196_RS01525 (NMBM04240196_0268)	-	271221..271529 (-)	309	WP_306807993.1	exodeoxyribonuclease VII small subunit	-
NMBM04240196_RS01530 (NMBM04240196_0269)	rsgA	271557..272480 (-)	924	WP_002231620.1	ribosome small subunit-dependent GTPase A	-
NMBM04240196_RS01535 (NMBM04240196_0270)	-	272485..274341 (-)	1857	WP_014581311.1	ABC transporter ATP-binding protein	-
NMBM04240196_RS15075	-	274367..274504 (-)	138	WP_002215654.1	hypothetical protein	-
NMBM04240196_RS01545 (NMBM04240196_0271)	ruvA	274504..275088 (-)	585	WP_014581312.1	Holliday junction branch migration protein RuvA	Machinery gene
NMBM04240196_RS01550 (NMBM04240196_0272)	-	275170..275496 (-)	327	WP_002235414.1	PepSY domain-containing protein	-
NMBM04240196_RS01555 (NMBM04240196_0273)	-	275550..276269 (-)	720	WP_002231625.1	septal ring lytic transglycosylase RlpA family protein	-
NMBM04240196_RS11890	-	276266..276388 (-)	123	WP_009346050.1	hypothetical protein	-
NMBM04240196_RS01560 (NMBM04240196_0274)	trmL	276399..276863 (-)	465	WP_002218664.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NMBM04240196_RS01565 (NMBM04240196_0275)	-	276928..277653 (-)	726	WP_014581313.1	ComF family protein	-
NMBM04240196_RS01570 (NMBM04240196_0276)	bioH	277652..278395 (+)	744	WP_002221926.1	pimeloyl-ACP methyl ester esterase BioH	-
NMBM04240196_RS01575 (NMBM04240196_0277)	-	278397..279185 (+)	789	WP_002221927.1	hypothetical protein	-
NMBM04240196_RS15675	-	279512..279643 (+)	132	WP_257390942.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20688.93 Da
• Isoelectric Point: 5.8480

>NTDB_id=38870 NMBM04240196_RS01545 WP_014581312.1 274504..275088(-) (ruvA) [Neisseria meningitidis M04-240196]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVSG
IGAKTALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=38870 NMBM04240196_RS01545 WP_014581312.1 274504..275088(-) (ruvA) [Neisseria meningitidis M04-240196]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAGCGCAAAACATTCCGCCAACTGATCAAGGTCAGCGGC
ATCGGGGCAAAAACCGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCAGGCGGTTGCAGAAGAAGATGT
CAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCA
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGAAAGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

• Helix-hairpin-helix domain (HHH_5) (72-129)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	38.5	100	0.397
ruvA	Streptococcus pneumoniae D39	38.5	100	0.397
ruvA	Streptococcus pneumoniae TIGR4	38	100	0.392
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.437	100	0.376