Detailed information NTG0388184

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: F3129_RS12670
• Genome accession: NZ_CP044133
• Coordinates: 2603424..2604038 (-)
• Length: 204 a.a.
• NCBI ID: WP_015240245.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FJAT-46737
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2598424..2609038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3129_RS12640 (F3129_12640)	rpsT	2598727..2598993 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
F3129_RS12645 (F3129_12645)	holA	2599010..2600051 (-)	1042	Protein_2444	DNA polymerase III subunit delta	-
F3129_RS12650 (F3129_12650)	-	2600091..2600242 (-)	152	Protein_2445	hypothetical protein	-
F3129_RS12655 (F3129_12655)	-	2600283..2600417 (+)	135	WP_003152870.1	YqzM family protein	-
F3129_RS12660 (F3129_12660)	comEC	2600436..2602787 (-)	2352	WP_072589388.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
F3129_RS12665 (F3129_12665)	-	2602788..2603357 (-)	570	WP_003152868.1	ComE operon protein 2	-
F3129_RS12670 (F3129_12670)	comEA	2603424..2604038 (-)	615	WP_015240245.1	helix-hairpin-helix domain-containing protein	Machinery gene
F3129_RS12675 (F3129_12675)	comER	2604097..2604918 (+)	822	WP_015240246.1	late competence protein ComER	-
F3129_RS12680 (F3129_12680)	-	2604987..2605724 (-)	738	WP_015417856.1	class I SAM-dependent methyltransferase	-
F3129_RS12685 (F3129_12685)	rsfS	2605721..2606077 (-)	357	WP_007408260.1	ribosome silencing factor	-
F3129_RS12690 (F3129_12690)	yqeK	2606095..2606655 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
F3129_RS12695 (F3129_12695)	-	2606645..2607214 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
F3129_RS12700 (F3129_12700)	yhbY	2607225..2607515 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
F3129_RS12705 (F3129_12705)	aroE	2607509..2608351 (-)	843	WP_025285019.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22209.32 Da
• Isoelectric Point: 5.5211

>NTDB_id=388184 F3129_RS12670 WP_015240245.1 2603424..2604038(-) (comEA) [Bacillus velezensis strain FJAT-46737]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=388184 F3129_RS12670 WP_015240245.1 2603424..2604038(-) (comEA) [Bacillus velezensis strain FJAT-46737]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACAGCAGACGATAAGATTATGATTGATGTGAAAGGTGCGGTCCGGAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGCACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCAATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAGAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363