Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   F5K02_RS16155 Genome accession   NZ_CP044132
Coordinates   3253465..3255771 (-) Length   768 a.a.
NCBI ID   WP_094032817.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZKY01     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3248465..3260771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5K02_RS16115 (F5K02_16215) - 3248925..3249356 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  F5K02_RS16120 (F5K02_16220) - 3249356..3249697 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  F5K02_RS16125 (F5K02_16225) - 3249690..3251171 (+) 1482 WP_042635451.1 Na+/H+ antiporter subunit D -
  F5K02_RS16130 (F5K02_16230) - 3251177..3251653 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  F5K02_RS16135 (F5K02_16235) - 3251653..3251937 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  F5K02_RS16140 (F5K02_16240) mnhG 3251921..3252295 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  F5K02_RS16145 (F5K02_16245) - 3252335..3252718 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  F5K02_RS16150 (F5K02_16250) comA 3252740..3253384 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  F5K02_RS16155 (F5K02_16255) comP 3253465..3255771 (-) 2307 WP_094032817.1 sensor histidine kinase Regulator
  F5K02_RS16160 (F5K02_16260) comX 3255790..3255966 (-) 177 WP_015240484.1 competence pheromone ComX -
  F5K02_RS16165 (F5K02_16265) - 3255981..3256856 (-) 876 WP_025285191.1 polyprenyl synthetase family protein -
  F5K02_RS16170 (F5K02_16270) degQ 3257008..3257148 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  F5K02_RS16175 (F5K02_16280) - 3257611..3257952 (+) 342 WP_007408677.1 hypothetical protein -
  F5K02_RS16180 (F5K02_16285) - 3257959..3259182 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89433.67 Da        Isoelectric Point: 8.2647

>NTDB_id=388119 F5K02_RS16155 WP_094032817.1 3253465..3255771(-) (comP) [Bacillus amyloliquefaciens strain ZKY01]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKIPTEENI
KGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEIFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=388119 F5K02_RS16155 WP_094032817.1 3253465..3255771(-) (comP) [Bacillus amyloliquefaciens strain ZKY01]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTTGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTACAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAATACCGACAGAAGAGAATATA
AAAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGCTTGTTGTGTATTT
TTTACATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCACTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGATATTCCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TATTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCGTTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGAAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTAAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCCGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGCCTGGTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAAC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(568-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.885

100

0.591


Multiple sequence alignment