Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   F5K02_RS02045 Genome accession   NZ_CP044132
Coordinates   435657..436610 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus amyloliquefaciens strain ZKY01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430657..441610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5K02_RS02020 (F5K02_02020) - 430706..432127 (+) 1422 WP_195182934.1 HAMP domain-containing sensor histidine kinase -
  F5K02_RS02025 (F5K02_02025) rapC 432289..433437 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  F5K02_RS02030 (F5K02_02030) phrC 433421..433540 (+) 120 WP_064115825.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  F5K02_RS02035 (F5K02_02035) - 433689..433784 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  F5K02_RS02040 (F5K02_02040) - 433879..435243 (-) 1365 WP_241457887.1 aspartate kinase -
  F5K02_RS02045 (F5K02_02045) ceuB 435657..436610 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  F5K02_RS02050 (F5K02_02050) - 436600..437547 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  F5K02_RS02055 (F5K02_02055) - 437541..438299 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  F5K02_RS02060 (F5K02_02060) - 438321..439265 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  F5K02_RS02065 (F5K02_02065) - 439307..440731 (-) 1425 WP_033575079.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=388072 F5K02_RS02045 WP_015239156.1 435657..436610(+) (ceuB) [Bacillus amyloliquefaciens strain ZKY01]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=388072 F5K02_RS02045 WP_015239156.1 435657..436610(+) (ceuB) [Bacillus amyloliquefaciens strain ZKY01]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTTGGGTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACTTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment