Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BATR1942_RS13145 Genome accession   NC_014639
Coordinates   2685857..2688166 (-) Length   769 a.a.
NCBI ID   WP_003327153.1    Uniprot ID   -
Organism   Bacillus atrophaeus 1942     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2680857..2693166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BATR1942_RS13105 (BATR1942_13655) - 2681327..2681758 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  BATR1942_RS13110 (BATR1942_13660) - 2681758..2682099 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  BATR1942_RS13115 (BATR1942_13665) - 2682092..2683573 (+) 1482 WP_003327159.1 Na+/H+ antiporter subunit D -
  BATR1942_RS13120 (BATR1942_13670) - 2683579..2684055 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  BATR1942_RS13125 (BATR1942_13675) - 2684055..2684339 (+) 285 WP_003327157.1 Na(+)/H(+) antiporter subunit F1 -
  BATR1942_RS13130 (BATR1942_13680) mnhG 2684323..2684697 (+) 375 WP_003327156.1 monovalent cation/H(+) antiporter subunit G -
  BATR1942_RS13135 (BATR1942_13685) - 2684736..2685116 (-) 381 WP_003327155.1 hotdog fold thioesterase -
  BATR1942_RS13140 (BATR1942_13690) comA 2685134..2685775 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  BATR1942_RS13145 (BATR1942_13695) comP 2685857..2688166 (-) 2310 WP_003327153.1 histidine kinase Regulator
  BATR1942_RS13150 (BATR1942_13700) comX 2688182..2688403 (-) 222 WP_003327152.1 competence pheromone ComX -
  BATR1942_RS13155 (BATR1942_13705) - 2688400..2689269 (-) 870 WP_003327151.1 polyprenyl synthetase family protein -
  BATR1942_RS13160 (BATR1942_13710) degQ 2689454..2689597 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  BATR1942_RS13165 (BATR1942_13715) - 2690057..2690416 (+) 360 WP_003327148.1 hypothetical protein -
  BATR1942_RS13170 (BATR1942_13720) - 2690435..2691667 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89201.58 Da        Isoelectric Point: 8.5488

>NTDB_id=38794 BATR1942_RS13145 WP_003327153.1 2685857..2688166(-) (comP) [Bacillus atrophaeus 1942]
MYKNINVYKYLSLVIIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTNVIDYTDEYYSGVKKGDIILEVNGKKGSD
VQLERGRLVNVESLTVERDNKSFRLQNVSLINEENLFMYLIPVISYSICLFCIFFVYRINKIRKSTSAYILILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFTELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLIPFFVLVLTVSILIHQGIRKIKQNEQKSILKVLAYTNILSFSPFIIFFIIPYVLFDTYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVIGRLKYYGFLAITPTVIVVTIFNYIQKPKDNIYSVKLTIVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQIIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGKITLLSKNNFKDIAYKNYEQYVQKFSGDIGKI
IEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVVKIEELMVHLEDLKQQESNPVWLKKL
MFAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYD
LGLVKALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDG
VGFDKEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=38794 BATR1942_RS13145 WP_003327153.1 2685857..2688166(-) (comP) [Bacillus atrophaeus 1942]
ATGTACAAAAATATTAACGTCTATAAATATTTGTCTTTAGTTATTATCATTTTAAGTTTTGTTTATGTGATCTATCTCTC
TTATATTTCTGTTTTTAACATCTTCGTAGGTGCGGATGTGAAGATTAATGAACAGGGGAAGTTAGAGGTCACCAATGTTA
TAGATTATACAGATGAATATTATTCAGGTGTAAAAAAGGGTGACATCATTCTTGAGGTGAATGGGAAAAAAGGAAGCGAT
GTTCAGTTAGAACGTGGAAGGTTGGTCAATGTAGAAAGTTTAACTGTTGAGAGAGATAATAAATCATTTCGTTTACAAAA
TGTAAGCCTAATAAATGAAGAAAATTTATTTATGTATCTCATTCCAGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAATAAGAAAATCAACTTCAGCTTATATTCTAATTTTATTTTTGTTATTTGTATCTGTA
GCGTATGTAAGTGCCTGCGGAGCTAGAAGAGGTGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATTCATTTTATATATAAATACTTTACAGAATTGGGAACTAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAAGATGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTAAACTTGATTCCCTTCTTTGTCTTAGTTCTTACTGTATCTATTCTTATCCATCAAGGCATAAGAAAAATCAAACAAAA
TGAGCAAAAGTCGATTTTGAAGGTCCTTGCTTATACGAATATCCTATCTTTCAGTCCCTTTATTATCTTTTTTATTATTC
CATATGTATTGTTTGATACGTATGTTTCACCCTTTAGTTTAGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACCAATAGACTTTATAATATTGACTTTGTTATAGGAAGGCTTAAGTACTATGGTTTTTTAGCAATTACTCC
TACTGTTATTGTGGTTACCATATTTAATTATATTCAAAAACCAAAAGATAACATTTATTCAGTTAAACTAACAATTGTAA
TATACTTGCTTATGTTTGCTGTTTTTTACTTTAAAGAGATCATTGACTTTCGTTTCAAGTTAAAAAGATTTACGGAGAAA
TTTAATTATCAAGATGGAATTTTTAAATTTACTCAGATAATAAAACAAGCATCATCGGTAGACCAAGTGCTTAATCACTT
TAAAAATACAATCTTAGAAGTACTAAATATAGATAATGCTTGCGTATATGATAATTCTAAAGGGAAAATTACCCTTCTTA
GCAAGAACAACTTTAAAGATATAGCTTATAAAAATTATGAGCAATATGTGCAAAAGTTTTCAGGCGATATTGGGAAAATT
ATAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGTGACAGGTCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACCTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TAGTGAAGATTGAAGAATTGATGGTGCATCTTGAAGATTTAAAACAACAAGAATCCAACCCGGTATGGCTGAAAAAGCTG
ATGTTCGCCATCGAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCTTT
AAAACGGCAATGCGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGC
AAATGAATCAGCAGATGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGAT
TTGGGATTGGTAAAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGG
AAGGTTTACGGCATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGA
AGCATTCCCAAGCCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGC
GTTGGCTTTGATAAGGAAAAATTGAATGAACAGTCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTTCGTGCGTT
AGACGGGCACCTTCGGATTGATACAAGCGTAGGAAATGGATTGCGAGCAGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.247

100

0.533


Multiple sequence alignment