Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FOB62_RS02120 Genome accession   NZ_CP044102
Coordinates   440166..440975 (-) Length   269 a.a.
NCBI ID   WP_003057211.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 435166..445975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS02110 (FOB62_02110) smc 435170..438715 (-) 3546 WP_003057203.1 chromosome segregation protein SMC -
  FOB62_RS02115 (FOB62_02115) rnc 438716..439408 (-) 693 WP_003057240.1 ribonuclease III -
  FOB62_RS02120 (FOB62_02120) vicX 440166..440975 (-) 810 WP_003057211.1 MBL fold metallo-hydrolase Regulator
  FOB62_RS02125 (FOB62_02125) vicK 440979..442331 (-) 1353 WP_014612101.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FOB62_RS02130 (FOB62_02130) vicR 442324..443034 (-) 711 WP_150336165.1 response regulator YycF Regulator
  FOB62_RS02135 (FOB62_02135) - 443293..444087 (+) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  FOB62_RS02140 (FOB62_02140) - 444087..444887 (+) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  FOB62_RS02145 (FOB62_02145) - 444901..445602 (+) 702 WP_003057191.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30191.40 Da        Isoelectric Point: 6.0739

>NTDB_id=387849 FOB62_RS02120 WP_003057211.1 440166..440975(-) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_654]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQFMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=387849 FOB62_RS02120 WP_003057211.1 440166..440975(-) (vicX) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTTATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment