Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   FOB76_RS08390 Genome accession   NZ_CP044093
Coordinates   1635049..1636359 (+) Length   436 a.a.
NCBI ID   WP_002989693.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_668     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1630049..1641359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB76_RS08370 (FOB76_08375) phoU 1630641..1631294 (+) 654 WP_002984514.1 phosphate signaling complex protein PhoU -
  FOB76_RS08380 (FOB76_08385) - 1631499..1634036 (+) 2538 WP_002989692.1 M1 family metallopeptidase -
  FOB76_RS08385 (FOB76_08390) ciaR 1634382..1635056 (+) 675 WP_002984519.1 response regulator transcription factor Regulator
  FOB76_RS08390 (FOB76_08395) ciaH 1635049..1636359 (+) 1311 WP_002989693.1 cell wall metabolism sensor histidine kinase WalK Regulator
  FOB76_RS08395 (FOB76_08400) rpsT 1636484..1636732 (-) 249 WP_009881183.1 30S ribosomal protein S20 -
  FOB76_RS08400 (FOB76_08405) coaA 1636786..1637706 (-) 921 WP_002989697.1 type I pantothenate kinase -
  FOB76_RS08405 (FOB76_08410) - 1637974..1638567 (+) 594 WP_002989699.1 class I SAM-dependent methyltransferase -
  FOB76_RS08410 (FOB76_08415) - 1639218..1639607 (+) 390 WP_002984531.1 cytidine deaminase -
  FOB76_RS08415 (FOB76_08420) - 1639701..1640753 (+) 1053 WP_002989701.1 BMP family protein -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 50119.65 Da        Isoelectric Point: 9.0641

>NTDB_id=387771 FOB76_RS08390 WP_002989693.1 1635049..1636359(+) (ciaH) [Streptococcus pyogenes strain FDAARGOS_668]
MNKLKKEILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKYRLGSIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIVKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=387771 FOB76_RS08390 WP_002989693.1 1635049..1636359(+) (ciaH) [Streptococcus pyogenes strain FDAARGOS_668]
ATGAATAAATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGACAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAATACCGTTTGGGGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACTGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGCATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGTGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAATTATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.895

100

0.58
  ciaH Streptococcus pneumoniae Rx1

51.37

100

0.516
  ciaH Streptococcus pneumoniae D39

51.37

100

0.516
  ciaH Streptococcus pneumoniae R6

51.37

100

0.516
  ciaH Streptococcus pneumoniae TIGR4

51.37

100

0.516

Multiple sequence alignment