Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | F1538_RS05100 | Genome accession | NZ_CP043771 |
| Coordinates | 1026173..1026847 (-) | Length | 224 a.a. |
| NCBI ID | WP_005647998.1 | Uniprot ID | Q4QLV0 |
| Organism | Haemophilus influenzae biotype aegyptius strain HE15/F3028 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1004206..1037633 | 1026173..1026847 | within | 0 |
Gene organization within MGE regions
Location: 1004206..1037633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1538_RS04935 (F1538_04945) | - | 1004206..1004637 (-) | 432 | WP_013526153.1 | gp436 family protein | - |
| F1538_RS04940 (F1538_04950) | - | 1004647..1004982 (-) | 336 | WP_013526154.1 | hypothetical protein | - |
| F1538_RS04945 (F1538_04955) | - | 1005018..1005938 (-) | 921 | WP_013526155.1 | Mu-like prophage major head subunit gpT family protein | - |
| F1538_RS04950 (F1538_04960) | - | 1005938..1006873 (-) | 936 | WP_232501049.1 | phage protease | - |
| F1538_RS04955 (F1538_04965) | - | 1006815..1007168 (-) | 354 | WP_013526157.1 | phage virion morphogenesis protein | - |
| F1538_RS04960 (F1538_04970) | - | 1007311..1008627 (-) | 1317 | WP_013526158.1 | phage minor head protein | - |
| F1538_RS04965 (F1538_04975) | - | 1008611..1010232 (-) | 1622 | Protein_967 | DUF935 domain-containing protein | - |
| F1538_RS04970 (F1538_04980) | terL | 1010312..1011961 (-) | 1650 | WP_013526159.1 | phage terminase large subunit | - |
| F1538_RS04975 (F1538_04985) | - | 1012111..1012611 (-) | 501 | WP_013526160.1 | DUF1804 family protein | - |
| F1538_RS04980 (F1538_04990) | - | 1012613..1012879 (-) | 267 | WP_005661915.1 | hypothetical protein | - |
| F1538_RS04985 (F1538_04995) | - | 1012879..1013136 (-) | 258 | WP_005684166.1 | hypothetical protein | - |
| F1538_RS04990 (F1538_05000) | - | 1013260..1013517 (-) | 258 | WP_013526161.1 | DUF2681 domain-containing protein | - |
| F1538_RS04995 (F1538_05005) | - | 1013517..1013807 (-) | 291 | WP_041174960.1 | DUF2644 domain-containing protein | - |
| F1538_RS10170 | - | 1013804..1013971 (-) | 168 | WP_171034543.1 | hypothetical protein | - |
| F1538_RS05000 (F1538_05010) | - | 1013961..1014464 (-) | 504 | WP_013526163.1 | glycoside hydrolase family 108 protein | - |
| F1538_RS05005 (F1538_05015) | - | 1014545..1014973 (-) | 429 | WP_013526164.1 | Mor transcription activator family protein | - |
| F1538_RS05010 (F1538_05020) | - | 1015085..1015501 (-) | 417 | WP_013526165.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| F1538_RS05015 (F1538_05025) | - | 1015556..1015732 (-) | 177 | WP_041174961.1 | type II toxin-antitoxin system HicA family toxin | - |
| F1538_RS05020 (F1538_05030) | - | 1015857..1016075 (-) | 219 | WP_005641522.1 | hypothetical protein | - |
| F1538_RS05025 (F1538_05035) | - | 1016086..1016727 (-) | 642 | WP_013526166.1 | antA/AntB antirepressor family protein | - |
| F1538_RS05030 (F1538_05040) | - | 1017264..1017467 (-) | 204 | WP_006996626.1 | KilA-N domain-containing protein | - |
| F1538_RS05035 (F1538_05045) | - | 1017494..1017892 (-) | 399 | WP_013526167.1 | gp16 family protein | - |
| F1538_RS05040 (F1538_05050) | - | 1018133..1018381 (-) | 249 | WP_006996624.1 | hypothetical protein | - |
| F1538_RS05045 (F1538_05055) | - | 1018386..1018559 (-) | 174 | WP_006996623.1 | hypothetical protein | - |
| F1538_RS10175 | - | 1018556..1018720 (-) | 165 | WP_171034544.1 | hypothetical protein | - |
| F1538_RS05050 (F1538_05060) | - | 1018731..1018928 (-) | 198 | WP_006996621.1 | ANR family transcriptional regulator | - |
| F1538_RS05055 (F1538_05065) | - | 1019115..1019732 (-) | 618 | WP_013526168.1 | DUF3164 family protein | - |
| F1538_RS05060 (F1538_05070) | - | 1019733..1019924 (-) | 192 | WP_005647090.1 | HTH domain-containing protein | - |
| F1538_RS05065 (F1538_05075) | - | 1019933..1020229 (-) | 297 | WP_013526169.1 | hypothetical protein | - |
| F1538_RS05070 (F1538_05080) | - | 1020241..1021121 (-) | 881 | Protein_990 | AAA family ATPase | - |
| F1538_RS05075 (F1538_05085) | - | 1021173..1021571 (-) | 399 | WP_032826358.1 | hypothetical protein | - |
| F1538_RS05080 (F1538_05090) | - | 1021582..1023567 (-) | 1986 | WP_013526171.1 | Mu transposase C-terminal domain-containing protein | - |
| F1538_RS05085 (F1538_05095) | - | 1023611..1023889 (-) | 279 | WP_041174962.1 | helix-turn-helix domain-containing protein | - |
| F1538_RS05090 (F1538_05100) | - | 1024065..1024781 (+) | 717 | WP_013526172.1 | S24 family peptidase | - |
| F1538_RS10180 | - | 1025162..1025329 (-) | 168 | WP_158305134.1 | hypothetical protein | - |
| F1538_RS05095 (F1538_05105) | rumB | 1025374..1025808 (+) | 435 | Protein_996 | 23S rRNA (uracil(747)-C(5))-methyltransferase | - |
| F1538_RS05100 (F1538_05110) | crp | 1026173..1026847 (-) | 675 | WP_005647998.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| F1538_RS05105 (F1538_05115) | - | 1026832..1027083 (-) | 252 | WP_005647999.1 | YheU family protein | - |
| F1538_RS05110 (F1538_05120) | slmA | 1027105..1027761 (-) | 657 | WP_005648000.1 | nucleoid occlusion factor SlmA | - |
| F1538_RS05115 (F1538_05125) | dut | 1027765..1028220 (-) | 456 | WP_005631431.1 | dUTP diphosphatase | - |
| F1538_RS05120 (F1538_05130) | coaBC | 1028268..1029470 (-) | 1203 | WP_011272308.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| F1538_RS05125 (F1538_05135) | radC | 1029633..1030298 (+) | 666 | WP_013526173.1 | DNA repair protein RadC | - |
| F1538_RS05130 (F1538_05140) | rpmB | 1030512..1030748 (+) | 237 | WP_005542826.1 | 50S ribosomal protein L28 | - |
| F1538_RS05135 (F1538_05145) | rpmG | 1030760..1030930 (+) | 171 | WP_005613503.1 | 50S ribosomal protein L33 | - |
| F1538_RS05140 (F1538_05150) | - | 1031278..1032642 (+) | 1365 | WP_013526174.1 | diaminobutyrate--2-oxoglutarate transaminase | - |
| F1538_RS05145 (F1538_05155) | ddc | 1032833..1034368 (+) | 1536 | WP_013526175.1 | L-2,4-diaminobutyrate decarboxylase | - |
| F1538_RS05150 (F1538_05160) | mutM | 1034603..1035418 (+) | 816 | WP_013526176.1 | DNA-formamidopyrimidine glycosylase | - |
| F1538_RS05155 (F1538_05165) | degS | 1035492..1036514 (-) | 1023 | WP_013526177.1 | outer membrane-stress sensor serine endopeptidase DegS | - |
| F1538_RS05160 (F1538_05170) | ribD | 1036515..1037633 (-) | 1119 | WP_013526178.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 25151.85 Da Isoelectric Point: 6.8375
>NTDB_id=385802 F1538_RS05100 WP_005647998.1 1026173..1026847(-) (crp) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
MSNELTEIDEVVTSSQEEATQRDPVLDWFLTHCHLHKYPAKSTLIHAGEDATTLYYVIKGSVMVSSKDDEGKEMILTYLG
AGQFFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLARRLQNTSRQVTNLAFLDVAGRIAQ
TLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRETVGRIIKMLEDQNLIHAHGKTIVVYGAR
MSNELTEIDEVVTSSQEEATQRDPVLDWFLTHCHLHKYPAKSTLIHAGEDATTLYYVIKGSVMVSSKDDEGKEMILTYLG
AGQFFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLARRLQNTSRQVTNLAFLDVAGRIAQ
TLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRETVGRIIKMLEDQNLIHAHGKTIVVYGAR
Nucleotide
Download Length: 675 bp
>NTDB_id=385802 F1538_RS05100 WP_005647998.1 1026173..1026847(-) (crp) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
ATGTCAAATGAATTAACCGAAATTGATGAAGTTGTAACCTCCTCTCAAGAAGAAGCAACTCAACGAGATCCCGTTTTAGA
TTGGTTTCTTACTCACTGCCATTTGCATAAATATCCTGCAAAATCAACTTTAATTCATGCTGGGGAAGATGCGACCACGC
TGTATTATGTAATTAAAGGTTCTGTAATGGTATCTTCAAAAGATGATGAAGGCAAAGAGATGATCCTCACTTACTTAGGA
GCAGGACAATTTTTTGGCGAAGCGGGATTATTTGATGAAGGTTCAAAACGATCAGCTTGGGTAAAAACAAAAACAACATG
TGAAATTGCTGAAATTTCCTATAAGAAATATCGCCAGTTGATTCAGGCAAACCCTGAAATCTTAATGTTTCTCACTGCAC
AATTGGCAAGACGTTTGCAAAATACATCACGTCAAGTCACGAATTTGGCATTTTTAGACGTCGCAGGTCGCATCGCTCAA
ACTTTAATGAACTTAGCTAAACAGCCTGAAGCAATGACGCATCCTGATGGTATGCAAATCAAAATTACACGCCAAGAAAT
AGGGCAAATGGTGGGTTGTTCACGAGAAACTGTGGGGCGCATTATTAAGATGTTGGAGGATCAGAATCTTATCCACGCTC
ATGGAAAAACAATCGTTGTATATGGCGCAAGATAA
ATGTCAAATGAATTAACCGAAATTGATGAAGTTGTAACCTCCTCTCAAGAAGAAGCAACTCAACGAGATCCCGTTTTAGA
TTGGTTTCTTACTCACTGCCATTTGCATAAATATCCTGCAAAATCAACTTTAATTCATGCTGGGGAAGATGCGACCACGC
TGTATTATGTAATTAAAGGTTCTGTAATGGTATCTTCAAAAGATGATGAAGGCAAAGAGATGATCCTCACTTACTTAGGA
GCAGGACAATTTTTTGGCGAAGCGGGATTATTTGATGAAGGTTCAAAACGATCAGCTTGGGTAAAAACAAAAACAACATG
TGAAATTGCTGAAATTTCCTATAAGAAATATCGCCAGTTGATTCAGGCAAACCCTGAAATCTTAATGTTTCTCACTGCAC
AATTGGCAAGACGTTTGCAAAATACATCACGTCAAGTCACGAATTTGGCATTTTTAGACGTCGCAGGTCGCATCGCTCAA
ACTTTAATGAACTTAGCTAAACAGCCTGAAGCAATGACGCATCCTGATGGTATGCAAATCAAAATTACACGCCAAGAAAT
AGGGCAAATGGTGGGTTGTTCACGAGAAACTGTGGGGCGCATTATTAAGATGTTGGAGGATCAGAATCTTATCCACGCTC
ATGGAAAAACAATCGTTGTATATGGCGCAAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Haemophilus influenzae Rd KW20 |
100 |
100 |
1 |
| crp | Vibrio cholerae strain A1552 |
75.49 |
91.071 |
0.687 |
| crp | Acinetobacter baumannii D1279779 |
48.705 |
86.161 |
0.42 |