Detailed information NTG0038562

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPPC_RS01645
• Genome accession: NC_014555
• Coordinates: 333228..334028 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841116.1
• Uniprot ID: -
• Organism: Helicobacter pylori PeCan4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 328228..339028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPC_RS01610 (HPPC_01660)	pseH	328723..329265 (+)	543	WP_000742591.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPPC_RS01615 (HPPC_01665)	-	329198..330136 (-)	939	WP_000833935.1	tetraacyldisaccharide 4'-kinase	-
HPPC_RS01620 (HPPC_01670)	-	330133..330915 (-)	783	WP_001168212.1	NAD+ synthase	-
HPPC_RS01630 (HPPC_01675)	ilvC	331164..332156 (+)	993	WP_001207749.1	ketol-acid reductoisomerase	-
HPPC_RS01635 (HPPC_01680)	minD	332180..332986 (+)	807	WP_001019031.1	septum site-determining protein MinD	-
HPPC_RS01640 (HPPC_01685)	minE	332983..333216 (+)	234	WP_000051431.1	cell division topological specificity factor MinE	-
HPPC_RS01645 (HPPC_01690)	dprA	333228..334028 (+)	801	WP_000841116.1	DNA-processing protein DprA	Machinery gene
HPPC_RS01650 (HPPC_01695)	dprB	334025..334429 (+)	405	WP_000599162.1	Holliday junction resolvase RuvX	Machinery gene
HPPC_RS01655 (HPPC_01705)	-	334561..335241 (+)	681	WP_000840151.1	tetratricopeptide repeat protein	-
HPPC_RS01660 (HPPC_01715)	-	335435..335773 (+)	339	WP_000699919.1	hypothetical protein	-
HPPC_RS01665 (HPPC_01720)	-	335757..336317 (+)	561	WP_000037140.1	hypothetical protein	-
HPPC_RS08620	-	336329..336640 (+)	312	Protein_321	glycoside hydrolase family protein	-
HPPC_RS08625	-	336743..337010 (+)	268	Protein_322	lysozyme	-
HPPC_RS01675	-	337268..337411 (+)	144	Protein_323	DUF1294 domain-containing protein	-
HPPC_RS01680	-	337411..338196 (+)	786	WP_041199514.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29770.65 Da
• Isoelectric Point: 8.5925

>NTDB_id=38562 HPPC_RS01645 WP_000841116.1 333228..334028(+) (dprA) [Helicobacter pylori PeCan4]
MKSNFQYSALENIPKAFDTLKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=38562 HPPC_RS01645 WP_000841116.1 333228..334028(+) (dprA) [Helicobacter pylori PeCan4]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGATACGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGGATGCGCCTTTAAAAGTGGCGATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414