Detailed information NTG0038522

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NMV_RS01465
• Genome accession: NC_017501
• Coordinates: 271663..272247 (-)
• Length: 194 a.a.
• NCBI ID: WP_002223336.1
• Uniprot ID: Q9K1A2
• Organism: Neisseria meningitidis 8013
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 266663..277247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMV_RS01435 (NMV_0285)	-	266940..267239 (+)	300	WP_002215645.1	DUF2818 family protein	-
NMV_RS01440 (NMV_0286)	-	267348..268244 (-)	897	WP_002224264.1	polyprenyl synthetase family protein	-
NMV_RS01445 (NMV_0287)	-	268228..268452 (-)	225	WP_002228918.1	exodeoxyribonuclease VII small subunit	-
NMV_RS01450 (NMV_0288)	rsgA	268716..269639 (-)	924	WP_002218658.1	ribosome small subunit-dependent GTPase A	-
NMV_RS01455 (NMV_0289)	-	269644..271500 (-)	1857	WP_014573735.1	ABC transporter ATP-binding protein	-
NMV_RS15455	-	271526..271663 (-)	138	WP_002231623.1	hypothetical protein	-
NMV_RS01465 (NMV_0290)	ruvA	271663..272247 (-)	585	WP_002223336.1	Holliday junction branch migration protein RuvA	Machinery gene
NMV_RS01470 (NMV_0291)	-	272329..272655 (-)	327	WP_002255647.1	PepSY domain-containing protein	-
NMV_RS01475 (NMV_0292)	-	272709..273428 (-)	720	WP_002221595.1	septal ring lytic transglycosylase RlpA family protein	-
NMV_RS11995	-	273425..273547 (-)	123	WP_009346050.1	hypothetical protein	-
NMV_RS01480 (NMV_0293)	trmL	273558..274022 (-)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NMV_RS01485 (NMV_0294)	-	274087..274812 (-)	726	WP_014573736.1	ComF family protein	-
NMV_RS01490 (NMV_0295)	bioH	274811..275554 (+)	744	WP_002226006.1	pimeloyl-ACP methyl ester esterase BioH	-
NMV_RS01495 (NMV_0296)	-	275556..276344 (+)	789	WP_012222066.1	hypothetical protein	-
NMV_RS01500	-	276532..276801 (+)	270	WP_002221591.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20687.90 Da
• Isoelectric Point: 5.3813

>NTDB_id=38522 NMV_RS01465 WP_002223336.1 271663..272247(-) (ruvA) [Neisseria meningitidis 8013]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=38522 NMV_RS01465 WP_002223336.1 271663..272247(-) (ruvA) [Neisseria meningitidis 8013]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCCGAAGAAGACGT
GAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-62)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA, C-terminal domain (RuvA_C) (150-192)

3D structure

• AlphaFold DB: Q9K1A2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Streptococcus pneumoniae TIGR4	37	100	0.381
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.437	100	0.376