Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BAMF_RS26765 Genome accession   NC_014551
Coordinates   1251608..1252264 (+) Length   218 a.a.
NCBI ID   WP_014470612.1    Uniprot ID   A0AAP7N9L0
Organism   Bacillus amyloliquefaciens DSM 7 = ATCC 23350     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1246608..1257264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMF_RS26740 (BAMF_1220) oppF 1247137..1248054 (+) 918 WP_013351828.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BAMF_RS26745 (BAMF_1221) - 1248162..1249349 (+) 1188 WP_013351829.1 putative glycoside hydrolase -
  BAMF_RS26750 (BAMF_1222) - 1249467..1250045 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  BAMF_RS26755 (BAMF_1223) spx 1250223..1250618 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  BAMF_RS26760 (BAMF_1224) - 1250676..1251332 (-) 657 WP_013351831.1 TerC family protein -
  BAMF_RS26765 (BAMF_1225) mecA 1251608..1252264 (+) 657 WP_014470612.1 adaptor protein MecA Regulator
  BAMF_RS26770 (BAMF_1226) - 1252416..1253576 (+) 1161 WP_013351833.1 competence protein CoiA family protein -
  BAMF_RS26775 (BAMF_1227) pepF 1253805..1255634 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  BAMF_RS41500 (BAMF_1228) - 1255670..1255837 (-) 168 WP_003155026.1 hypothetical protein -
  BAMF_RS26785 (BAMF_1229) spxH 1256122..1257024 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25982.77 Da        Isoelectric Point: 4.0828

>NTDB_id=38470 BAMF_RS26765 WP_014470612.1 1251608..1252264(+) (mecA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=38470 BAMF_RS26765 WP_014470612.1 1251608..1252264(+) (mecA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTCT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899

Multiple sequence alignment