Detailed information NTG0383508

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FX981_RS10370
• Genome accession: NZ_CP043404
• Coordinates: 2092704..2093879 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain PgKB20
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2087704..2098879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FX981_RS10350 (FX981_02077)	tuaH	2088301..2089497 (+)	1197	WP_041108506.1	teichuronic acid biosynthesis protein TuaH	-
FX981_RS10355 (FX981_02078)	-	2089632..2090699 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
FX981_RS10360 (FX981_02079)	-	2090733..2091830 (-)	1098	Protein_2005	LCP family protein	-
FX981_RS10365 (FX981_02080)	-	2091815..2092483 (-)	669	WP_144666227.1	YigZ family protein	-
FX981_RS10370 (FX981_02081)	degS	2092704..2093879 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
FX981_RS10375 (FX981_02082)	degU	2093944..2094633 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
FX981_RS10380 (FX981_02083)	-	2094849..2095691 (+)	843	WP_024423625.1	DegV family protein	-
FX981_RS10385 (FX981_02084)	comFA	2095812..2097209 (+)	1398	WP_276507389.1	DEAD/DEAH box helicase	Machinery gene
FX981_RS10390 (FX981_02085)	-	2097258..2097551 (+)	294	WP_025093967.1	late competence development ComFB family protein	-
FX981_RS19320 (FX981_02086)	comFC	2097578..2098234 (+)	657	WP_244948474.1	ComF family protein	Machinery gene
FX981_RS10400 (FX981_02087)	-	2098291..2098710 (+)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=383508 FX981_RS10370 WP_003213166.1 2092704..2093879(+) (degS) [Bacillus safensis strain PgKB20]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=383508 FX981_RS10370 WP_003213166.1 2092704..2093879(+) (degS) [Bacillus safensis strain PgKB20]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGTCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTTCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGATTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTTATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841