Detailed information NTG0382800

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: FXN65_RS09975
• Genome accession: NZ_CP043311
• Coordinates: 2124148..2126373 (+)
• Length: 741 a.a.
• NCBI ID: WP_178119296.1
• Uniprot ID: -
• Organism: Metapseudomonas lalkuanensis strain PE08
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2119148..2131373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXN65_RS09950 (FXN65_09950)	-	2119394..2119978 (-)	585	WP_151133034.1	PilZ domain-containing protein	-
FXN65_RS09955 (FXN65_09955)	-	2120146..2121396 (+)	1251	WP_151133035.1	lipoprotein-releasing ABC transporter permease subunit	-
FXN65_RS09960 (FXN65_09960)	lolD	2121389..2122072 (+)	684	WP_151133036.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
FXN65_RS09965 (FXN65_09965)	-	2122074..2123318 (+)	1245	WP_151133037.1	lipoprotein-releasing ABC transporter permease subunit	-
FXN65_RS09970 (FXN65_09970)	-	2123447..2123974 (-)	528	WP_151133038.1	DUF2062 domain-containing protein	-
FXN65_RS09975 (FXN65_09975)	comA	2124148..2126373 (+)	2226	WP_178119296.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FXN65_RS09980 (FXN65_09980)	-	2126446..2127081 (+)	636	WP_151133039.1	MotA/TolQ/ExbB proton channel family protein	-
FXN65_RS09985 (FXN65_09985)	-	2127078..2127524 (+)	447	WP_151133040.1	biopolymer transporter ExbD	-
FXN65_RS09990 (FXN65_09990)	lpxK	2127524..2128528 (+)	1005	WP_151133041.1	tetraacyldisaccharide 4'-kinase	-
FXN65_RS09995 (FXN65_09995)	-	2128568..2128753 (+)	186	WP_077525327.1	Trm112 family protein	-
FXN65_RS10000 (FXN65_10000)	kdsB	2128750..2129514 (+)	765	WP_151133042.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FXN65_RS10005 (FXN65_10005)	-	2129514..2129978 (+)	465	WP_151133043.1	low molecular weight protein-tyrosine-phosphatase	-
FXN65_RS10010 (FXN65_10010)	murB	2129975..2130994 (+)	1020	WP_151133044.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80518.73 Da
• Isoelectric Point: 10.3304

>NTDB_id=382800 FXN65_RS09975 WP_178119296.1 2124148..2126373(+) (comA) [Metapseudomonas lalkuanensis strain PE08]
MVSGLAAFAVGLLLLRWMPILPPVWWLYLQLILGLLLLGSRAWRIGLFLLGIGWACLSAQWALDDRLELRLDGQVRWLEG
RVVGLPSRADGVVRFELEDIHAPRAQLPQRLRLSWHDGPRVLAGERWRLAVRLKRPRGLANPATFDFEAWLLARRIGATG
SVKAGERLSPASGPVAWRDQLRQRLLQVDAWDRAGGLAALVLGDGSGLQDRDWRLLQDTGTTHLMVISGQHITLFAGVLY
GLVAVLARLGLWPRRLPWLPWACAMAFIGGLGYGILAGFDVPVRRACVMLAVVLLWRLRFRHLGFLTPLLAALCVVLVVE
PLVVLQTGFWLSFGAVALLVLAFAGRLGAWRWWMTWWRAQWVMGLGLAPLLLALALPISLSGPVANLVAVPWVSLVVLPL
ALLGAATLGIPWLGEALLWLAGGALELLFQVLAWTSAQLPAWIPVQLPVWAWSLGAMGVLLLIAPAGVPFRALGLALLVP
ALFPPQQRLGPGQAEVRVLDVGQGLSVLVRTREHALLYDAGPRRGDFDIGERVVVPTLRGLGVSRLGLMLISHADSDHAG
GALAVRRGLTVDRVLSGEPERLAPDLEAEPCAAGAAWSWDGVDFLVWQPPPGGDSNDSSCVLVVEAAGERILLSGDLGVR
GEAAWIASGQPLAARWLVAGHHGSRTSSSAAFLRAVKPEKVLISRGHLNAYGHPHPLVASRIRALPAEIHDTAEQGHLLL
RLGAFGEPEVEREKSVFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=382800 FXN65_RS09975 WP_178119296.1 2124148..2126373(+) (comA) [Metapseudomonas lalkuanensis strain PE08]
ATGGTCTCGGGCCTGGCCGCCTTTGCTGTCGGCCTTCTTCTTTTGCGCTGGATGCCCATCCTGCCGCCTGTCTGGTGGCT
CTATCTCCAGCTGATTCTCGGCTTGCTGCTGTTGGGCTCGCGGGCCTGGCGAATCGGGCTGTTCCTGCTCGGGATCGGCT
GGGCCTGCCTGAGCGCCCAATGGGCGCTGGATGACCGCCTGGAGCTGCGTCTGGACGGTCAGGTCCGCTGGCTGGAGGGG
AGGGTGGTCGGCTTGCCGAGCAGGGCAGATGGTGTGGTGCGATTCGAGTTGGAGGATATTCATGCACCTCGTGCGCAGTT
GCCCCAGCGCCTGCGGCTGTCCTGGCACGACGGACCGCGGGTACTGGCAGGAGAGCGTTGGCGCCTGGCGGTGCGCCTCA
AGCGGCCGCGCGGTCTCGCAAATCCGGCGACCTTCGATTTCGAAGCCTGGCTGCTGGCAAGGCGCATCGGTGCGACCGGC
TCGGTAAAGGCGGGTGAGCGCCTGTCTCCGGCCAGCGGTCCGGTTGCCTGGCGCGACCAGTTGCGCCAACGCCTGCTCCA
GGTGGACGCATGGGACCGGGCCGGCGGGCTCGCCGCGCTGGTGCTGGGCGATGGCTCCGGCCTGCAGGATCGGGACTGGC
GCCTGCTGCAAGACACTGGTACCACGCACCTGATGGTGATCTCCGGGCAGCACATCACCCTGTTCGCCGGCGTGCTCTAC
GGCCTTGTAGCGGTTCTCGCGCGATTGGGGCTCTGGCCAAGGCGCTTGCCCTGGTTGCCCTGGGCGTGCGCCATGGCCTT
CATTGGTGGGCTCGGTTACGGAATCCTGGCGGGGTTCGACGTGCCGGTCAGAAGGGCCTGCGTGATGCTGGCGGTGGTCC
TGCTTTGGCGTCTGCGCTTTCGCCACCTGGGGTTCCTCACTCCCTTGCTGGCCGCGCTCTGCGTTGTGCTGGTGGTCGAG
CCCCTGGTGGTCCTGCAGACCGGTTTCTGGTTGTCTTTCGGCGCAGTGGCGTTGCTGGTCCTGGCTTTCGCCGGACGTCT
GGGTGCCTGGCGCTGGTGGATGACCTGGTGGCGCGCCCAATGGGTGATGGGTCTCGGCCTTGCGCCGCTGCTGCTGGCCC
TGGCGTTGCCCATCAGTCTCAGCGGCCCCGTGGCCAACCTGGTGGCGGTGCCCTGGGTCAGTCTGGTGGTGCTGCCGCTG
GCCCTGTTGGGGGCCGCCACACTGGGCATTCCGTGGTTGGGAGAAGCGTTGCTATGGCTGGCCGGAGGTGCGCTGGAACT
GCTGTTCCAGGTGCTGGCCTGGACGTCTGCGCAGCTGCCTGCGTGGATACCCGTACAGCTCCCGGTGTGGGCCTGGTCGC
TGGGTGCGATGGGTGTCCTTCTGCTGATAGCGCCGGCTGGCGTGCCGTTTCGCGCACTCGGCCTGGCGTTGCTGGTGCCG
GCGCTTTTCCCGCCACAGCAGCGCTTAGGACCCGGTCAGGCCGAGGTGCGGGTGCTGGATGTCGGGCAGGGGCTTTCAGT
GCTGGTGCGTACCCGCGAGCACGCGTTGCTCTATGACGCCGGACCGCGCCGGGGCGACTTCGATATCGGCGAACGGGTGG
TGGTCCCCACCCTGCGAGGCCTTGGCGTATCCCGGCTCGGCCTGATGCTGATCAGCCATGCCGATTCGGACCACGCCGGT
GGGGCTCTGGCGGTTCGACGCGGATTGACCGTGGATCGGGTACTCAGCGGCGAGCCCGAACGCCTTGCGCCAGATCTTGA
AGCAGAGCCCTGCGCGGCGGGCGCGGCCTGGTCCTGGGACGGCGTGGATTTCCTGGTCTGGCAGCCGCCGCCGGGTGGCG
ACAGCAATGACAGCTCCTGCGTGCTGGTCGTCGAAGCCGCCGGCGAGCGCATACTGCTCAGCGGCGATCTGGGCGTTAGA
GGGGAGGCAGCCTGGATCGCCAGCGGCCAGCCGCTCGCGGCGCGCTGGCTGGTGGCCGGGCACCATGGCAGCCGGACTTC
TTCCAGCGCCGCTTTCCTGCGCGCCGTGAAACCGGAGAAGGTGCTGATTTCCCGCGGTCATCTGAATGCCTATGGCCACC
CGCATCCGTTGGTCGCATCGCGAATCCGCGCGCTGCCCGCGGAAATCCACGACACGGCGGAGCAGGGCCACCTGTTGCTG
CGTCTTGGCGCTTTTGGCGAGCCGGAAGTCGAGCGAGAAAAGTCCGTGTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-687)

• Competence protein (Competence) (200-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.361	97.166	0.606
comA	Ralstonia pseudosolanacearum GMI1000	35.901	100	0.39