Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FXO17_RS03420 Genome accession   NZ_CP043052
Coordinates   701291..701674 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP43     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 696291..706674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXO17_RS03410 (FXO17_03410) nolF 699189..700298 (-) 1110 WP_078210303.1 efflux RND transporter periplasmic adaptor subunit -
  FXO17_RS03415 (FXO17_03415) - 700368..701006 (-) 639 WP_005072790.1 hypothetical protein -
  FXO17_RS03420 (FXO17_03420) pilG 701291..701674 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FXO17_RS03425 (FXO17_03425) pilH 701697..702059 (+) 363 WP_002116220.1 response regulator -
  FXO17_RS03430 (FXO17_03430) pilI 702120..702656 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  FXO17_RS03435 (FXO17_03435) pilJ 702699..704777 (+) 2079 WP_002116191.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=380372 FXO17_RS03420 WP_000389061.1 701291..701674(+) (pilG) [Acinetobacter pittii strain AP43]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=380372 FXO17_RS03420 WP_000389061.1 701291..701674(+) (pilG) [Acinetobacter pittii strain AP43]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment