Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FXO11_RS19665 Genome accession   NZ_CP043042
Coordinates   4418976..4419368 (+) Length   130 a.a.
NCBI ID   WP_148864630.1    Uniprot ID   -
Organism   Marinobacter fonticola strain CS412     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4413976..4424368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXO11_RS19640 pyrR 4414743..4415267 (-) 525 WP_148864626.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FXO11_RS19645 ruvX 4415491..4415919 (-) 429 WP_148864627.1 Holliday junction resolvase RuvX -
  FXO11_RS19650 - 4415912..4416481 (-) 570 WP_202980262.1 YqgE/AlgH family protein -
  FXO11_RS19655 - 4416570..4417436 (-) 867 WP_148864628.1 energy transducer TonB -
  FXO11_RS19660 gshB 4417586..4418530 (-) 945 WP_148864629.1 glutathione synthase -
  FXO11_RS19665 pilG 4418976..4419368 (+) 393 WP_148864630.1 twitching motility response regulator PilG Regulator
  FXO11_RS19670 pilH 4419406..4419768 (+) 363 WP_004579734.1 twitching motility response regulator PilH -
  FXO11_RS19675 - 4419785..4420330 (+) 546 WP_148864631.1 chemotaxis protein CheW -
  FXO11_RS19680 - 4420407..4422479 (+) 2073 WP_148864632.1 methyl-accepting chemotaxis protein -
  FXO11_RS19685 - 4422526..4423425 (+) 900 WP_148864633.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14561.84 Da        Isoelectric Point: 5.8904

>NTDB_id=380295 FXO11_RS19665 WP_148864630.1 4418976..4419368(+) (pilG) [Marinobacter fonticola strain CS412]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADTQPDIVFVDIMMPRLDGYQTCALIKNNSAFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRHYVPTAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=380295 FXO11_RS19665 WP_148864630.1 4418976..4419368(+) (pilG) [Marinobacter fonticola strain CS412]
ATGGATGACAACTTCGAAAACCTGAAGATTATGGTGATTGACGATAGTAAGACGATTCGTCGCACCGCCGAAACCCTTCT
AAAAAAGGTTGGCTGTGAAGTCATCACCGCAACGGATGGATTCGACGCCCTTGCCAAGATTGCAGACACCCAGCCCGATA
TCGTTTTCGTCGATATCATGATGCCCCGGCTGGACGGGTATCAAACCTGCGCCCTCATTAAGAACAATTCCGCTTTCAAG
AAAACGCCCGTCATCATGCTATCCAGCAAAGACGGCCTTTTCGACAAGGCCAAGGGTCGTATTGTTGGCTCCGATCAGTA
CCTGACGAAACCGTTCAGCAAAGACGAACTGCTGAATACCATTCGTCACTACGTTCCCACCGCGGAACAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

97.692

0.762
  vicR Streptococcus mutans UA159

40.984

93.846

0.385
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment